Streptomyces tendae: F3L20_09705
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Entry
F3L20_09705 CDS
T09112
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
stee
Streptomyces tendae
Brite
KEGG Orthology (KO) [BR:
stee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stee03019
]
F3L20_09705
Enzymes [BR:
stee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
F3L20_09705
Messenger RNA biogenesis [BR:
stee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F3L20_09705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
nSTAND_NTPase5
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QER86131
UniProt:
A0ABX5ZPD1
LinkDB
All DBs
Position
2079219..2082077
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AA seq
952 aa
AA seq
DB search
MIVLLSVRPGTLESTMTEDLSPAERYAAARRRAAEQATSLASFREMYDFGLDPFQIEACQ
ALEAGKGVLVAAPTGSGKTIVGEFAVHLALQQGKKCFYTTPIKALSNQKYADLSRRYGSG
KVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLLGLGYVVMDEVHYLSDRFRGAVWE
EVIIHLPESVTLVSLSATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLFQHVLAGRRIYD
LFEEGEGRKKAVNPDLTRMARLEASRPSWGDRRRGRNNMREADRERERRQRSRVWTPSRP
EVIERLDSEGLLPAITFIFSRAACEAAVQQCLFAGLRLNDEEARAKVRDLVEERTASIPA
EDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPA
RSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGMNPEHLAGLAG
TRTYPLRSSFKPSYNMAVNLVEQFGRHRSRELLETSFAQFQADKSVVGISRQVQRNEEGL
EGYKASMTCHLGDFEEYARLRRELKDRENELARQGTAQRRAEAAVALEKLKPGDVIHVPT
GKYAGLALVLDPGLPAGRTNGHRGVEYHDGPRPLVLTAERQVKRLVSIDFPVPVEPLERM
RIPKSFNARSPQSRRDLASALRTKAGHIVPDRHHKNRSPAADDREIARLRKALRAHPCHG
CQDREDHARWAERYHRLMRDTSQLERRIEGRTNTIARTFDRIVALLTEMDYLRGDEVTEH
GKRLARLYGELDLLASECLRERVWEGLGPAELAACVSALVYESRVADDAMAPKLPSGKAK
AALGEMVRIWGRLDALEEDFRISQTEGVGQREPDLGFAWAAYMWASGKGLDEVLREAEMP
AGDFVRWCKQVIDVLGQISAAAPVAENSTVAKNARKAVDGLLRGVVAYSSVG
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcctgttgtcggtgcggcccggtacgctcgaaagcacgatgacagaggatctc
tcaccggccgagcggtacgcggcagcacgcaggcgcgctgccgagcaggccacctcgctc
gcctccttccgcgagatgtacgacttcggcctcgacccgttccagatcgaggcctgccag
gccctggaggcggggaagggcgtcctggtcgccgcccccaccggatccggcaagacgatc
gtcggcgagttcgccgtccacctcgccctccagcagggcaagaagtgcttctacacgacc
cccatcaaggcgctgtcgaaccagaagtacgccgatctgagccgccgctacggctccggc
aaggtgggcctgctcaccggtgacaacagcgtcaactccgacgcccccgtggtcgtgatg
accacggaggtcctgcggaacatgctgtacgcgggctcgcagacgctgctcggcctcggc
tacgtggtgatggacgaggtgcactacctctccgaccgcttccgcggcgcggtgtgggag
gaagtgatcatccacctcccggagtcggtgacgctggtctccctctccgcgaccgtgtcg
aacgcggaggagttcggcgactggctggacaccgtccgcggcgacaccgaggtgatcgtc
tccgagcaccggcccgtcccgctgttccagcacgtactggccggccgccggatctacgac
ctgttcgaggagggggagggccgcaagaaggccgtcaaccccgacctcacccgcatggcc
cggctggaggcgagccgcccgtcctggggtgaccgccggcgggggcgcaacaacatgcgg
gaggccgaccgtgagcgggagcgcagacagcgctcgcgggtgtggacgccgagccggccg
gaggtcatcgagcggctggactccgagggcctgctgcccgccatcaccttcatcttcagc
cgcgccgcctgcgaggccgcggtgcagcagtgcctgttcgcgggcctgcggctcaacgac
gaggaggcgcgggccaaggtccgcgacctggtcgaggagcgcaccgcctccatcccggcc
gaggacctgcacgtcctcggctactacgagtggctggagggcctggagcgcggcatagcg
gcgcaccacgcgggcatgctcccgaccttcaaggaggtcgtcgaggagctgttcgtgcgc
gggctggtcaaggccgtgttcgcgaccgagaccctcgccctcggcatcaacatgcccgcc
cgctcggtggtgctggagaaactggtcaagtggaacggcgagcagcacgccgacatcacg
cccggcgagtacacccagctgaccggccgggcgggccggcgcggcatcgacgtcgagggc
cacgccgtggtgctgtggcagcgcgggatgaaccccgagcacctggcgggactggccggc
acgcgcacctatccgctgcgctccagcttcaagccgtcgtacaacatggcggtcaacctg
gtcgagcagttcgggcggcaccggtcgcgggagctgctggagacgtcgttcgcgcagttc
caggcggacaagtcggtcgtcggcatctcgcgccaggtgcagcgcaacgaggagggtctg
gagggctacaaggcctcgatgacctgccacctcggcgacttcgaggagtacgcccggctg
cgccgcgagctgaaggaccgggagaacgagctggcccggcagggcaccgcgcagcggcgc
gcggaggcggccgtcgcgctggagaagctcaagcccggtgacgtcatccacgtgcccacc
ggcaagtacgccgggctggcgctggtgctcgacccggggctgcccgcgggccgcaccaac
ggccaccggggcgtggagtaccacgacggtccgcgcccgctggtgctgaccgccgaacgg
caggtgaagcggctggtgtcgatcgacttcccggtgccggtggagccgctggagcggatg
cggatccccaagtccttcaacgcgcgttccccgcagtcccgccgtgacctggcctccgcg
ctgcgcaccaaggccgggcacatcgtgccggaccggcaccacaagaaccgttccccggcg
gccgacgaccgggagatcgcgcggctgcgcaaggcgctgcgggcgcacccgtgccacggc
tgccaggaccgtgaggaccacgcccgctgggccgagcgctaccaccggctgatgcgggac
acctcgcagctggagcggcgcatcgagggccggacgaacaccatcgcccgtaccttcgac
cggatcgtggcgctgctgaccgagatggactacctgcgcggcgacgaggtcaccgagcac
ggcaagcggctggcgcggctgtacggcgaactcgacctgctggccagcgaatgcctgcgc
gagcgcgtctgggagggcctcggccccgccgaactcgccgcgtgcgtgtcggcgttggtg
tacgagtcacgggtcgccgacgacgcgatggcgcccaagctgccctcgggcaaggcgaag
gcggcgctcggcgagatggtccgcatctggggcaggctggacgcgctggaggaggacttc
cggatcagccagaccgagggtgtgggtcagcgcgagcccgacctgggcttcgcctgggcc
gcctacatgtgggcctccggcaagggcctggacgaggtgctgcgcgaggcggagatgccg
gccggtgacttcgtgcgctggtgcaagcaggtcatcgacgtgctggggcagatctccgcc
gccgccccggtcgcggagaactcgacggtcgcgaagaacgcccgcaaggcggtcgacggt
ctgctgcgcggggtggtggcctactcctccgtgggctga
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