Streptomyces tendae: F3L20_21375
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Entry
F3L20_21375 CDS
T09112
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stee
Streptomyces tendae
Brite
KEGG Orthology (KO) [BR:
stee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stee03021
]
F3L20_21375
Transcription machinery [BR:
stee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F3L20_21375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
DUF7343
GerE
HTH_3
DinB_2
Sigma70_ECF
MarR_2
MarR
Motif
Other DBs
NCBI-ProteinID:
QER88048
LinkDB
All DBs
Position
4654720..4655511
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AA seq
263 aa
AA seq
DB search
MRTVSPRKPHSHDDAPETTRDFVRLAGLPDGPERRRLRDELVTAWLPMAERIAVRFRGRG
EALEDLYQVAALGLVKAVDHYDPARGNAFEAYAVPTVTGEIKRHFRDHMWTLHVPRRVQD
LRNRVRGAAKELAQTTPGRAPTVAEIAAHARLTEDEVRTGMEALECFSALSLEAEMPGTD
GYALGDSIGGPDPAYDAVVDRVAVRPCLEALPERERLILYLRFFRGMTQSGIADQLGISQ
MHVSRLLSSCFAHVREELSTDPN
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccgtcagtcccaggaagccccactcccacgacgacgcgcccgagacgacccgg
gacttcgtgcgtctggccggtctgcccgacgggccggagcgacggaggctgcgcgacgag
ctggtcacggcctggctccccatggccgagcggatcgccgtgcggttccggggccgagga
gaggctctggaggatctgtaccaggtggcggccctcggtctggtgaaggccgtcgaccac
tacgacccggcgcgcgggaacgccttcgaggcatacgcggtgccgaccgtcacgggggag
atcaagcgccacttccgcgaccacatgtggacgctgcacgtgccgcgcagggtgcaggac
ctgcgcaaccgggtgcgcggtgcggcgaaggagctggcgcagacgacgccgggccgggcg
cccacggtcgccgagatcgccgcgcacgcccggctgacggaggacgaggtgcgcacgggt
atggaggcgctggagtgtttctccgccctctctctggaggcggagatgccgggcaccgac
gggtacgccctcggcgactcgatcggcggcccggacccggcgtacgacgccgtcgtggac
cgggtggcggtacggccctgtttggaggcgctgcccgagcgcgaacggctcatcctctac
ctgcgcttcttcagggggatgacgcagagcgggatcgccgaccagctcggcatctcccag
atgcacgtctcccgcctcctgagcagctgcttcgcccacgtccgcgaagaactctccacc
gacccgaactga
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