Streptomyces tendae: F3L20_23880
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Entry
F3L20_23880 CDS
T09112
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
stee
Streptomyces tendae
Pathway
stee03030
DNA replication
stee03430
Mismatch repair
stee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F3L20_23880 (dnaE)
03430 Mismatch repair
F3L20_23880 (dnaE)
03440 Homologous recombination
F3L20_23880 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stee03032
]
F3L20_23880 (dnaE)
03400 DNA repair and recombination proteins [BR:
stee03400
]
F3L20_23880 (dnaE)
Enzymes [BR:
stee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F3L20_23880 (dnaE)
DNA replication proteins [BR:
stee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F3L20_23880 (dnaE)
DNA repair and recombination proteins [BR:
stee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F3L20_23880 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QER88482
UniProt:
A0ABX5ZWF8
LinkDB
All DBs
Position
complement(5181717..5185256)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMSHIAMSDHGNLHGAYDFFHTAQKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWAVNSTGLHNLFRL
SSDAYAEGWLQKWPRMDKETIAQWSEGIVASTGCPSGEVQTRLRLGHFDEALKAAADYQD
IFGKDRYFLELMDHGIEIEHRVREGLLEIGRKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQQGCANTRLIAEMVDTTGMFEKRD
LMPKFDIPEGYTEVSWFREEVLRGMNRRFPDGIPDDRMKQVEYEMDTIISMGFPGYFLVV
ADFIMWAKKQGIAVGPGRGSAAGSIVAYALGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRITKAMP
ADVLGKGIPLSGITDPSHPRYSEAGEVRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSETITDHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGVDIDLLSLPLDDPTTFDLLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNGQQEITPIHPELEAPLKEVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFTIFQAGARKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
ESNFAAQGDDVILFGLSAVRNVGTNVVESIIKCRKAKGKYTSFPDYLDKVDAVVCNKRTT
ESLIKAGAFDSMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEEQSDEPGFGL
DVQFTDDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGISQLTGGDFGDGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSNAGTNAPVVLTIPATRVTPPMVSRLGEILTHHRGDSEVRI
KLQGPTRTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcctgcaacgagatgggcatgagccacatcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccacaccgcgcagaaggcc
ggggtcaccccgatcatcgggatcgaggcctacgtcgcccccgagtcccggcgcaacaag
cgcaagatccagtggggccagccccaccagaagcgcgacgacgtctccggctccggcggc
tacacccacaagaccatgtgggcggtgaacagcaccggcctgcacaacctcttccggctc
tcctccgacgcctacgccgagggctggctgcagaagtggccccggatggacaaggagacc
atcgcccagtggtccgagggcatcgtcgcctccaccggctgcccctccggcgaggtgcag
acccggctgcgcctcggccacttcgacgaggccctcaaggccgccgccgactaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcac
cgggtccgcgagggcctgctggagatcggcaggaagctcggcatcccgcccctggtcacc
aacgactcgcactacacctacgcgcacgaggcgacggcgcacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcagcagggctgc
gccaacacgcggctgatcgccgagatggtcgacaccaccggcatgttcgagaagcgcgac
ctgatgccgaagttcgacatcccggaggggtacaccgaggtcagctggttccgtgaggaa
gtcctgcgcggcatgaaccgccgcttcccggacggcatcccggacgaccgcatgaagcag
gtcgagtacgagatggacaccatcatctcgatgggcttcccgggctacttcctcgtggtc
gccgacttcatcatgtgggcgaagaagcagggcatcgccgtcggccccggccgtggctcc
gcggccggctcgatcgtcgcctacgccctcggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcgcttcctcaaccccgagcgcatctccatgcccgacgtcgacatc
gacttcgacgagcgccggcgcgtcgaggtgatccgctacgtcacggagaagtacggcgcc
gacaaggtcgccatgatcggcacgtacggcaccatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgcatcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcccgctgtccggcatcaccgacccctcgcacccccgg
tactccgaggccggcgaggtccgcgggatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtgcggcagatgggcgtgcacgcggccggc
gtgatcatgtccagcgagaccatcaccgaccacgtaccggtctgggtccggcacaccgac
ggcgtcaccatcacgcagtgggactacccgagctgcgagtcgctcggcctgctgaagatg
gacttcctgggcctgcggaacctgaccatcatggacgacgccgtcaagatggtgaaggcc
aacaagggcgtcgacatcgacctgctgtcgctgcccctggacgaccccacgaccttcgac
ctgctccagcgcggcgacaccctcggcgtgttccagttcgacggcggaccgatgcgctcc
ctgctccggctgatgaagccggacaacttcgaggacatctctgccgtgtcggccctgtac
cggccgggcccgatgggcatgaactcgcacaccaactacgccctgcgcaagaacggccag
caggagatcaccccgatccaccccgagctggaggccccgctcaaggaggtcctggacgtc
acctacggcctgatcgtctatcaggagcaggtgcagaaggccgcccagatcatcgccggc
tactcgctcggcgaggccgacatcctccgccgcgtgatgggcaagaagaagcccgaggaa
ctggcgaagaacttcaccatcttccaggccggcgcccgcaagaacggctacagcgacgag
gccatccaggcgctgtgggacgtgctggtccccttcgccggctacgccttcaacaaggcg
cactccgccgcgtacggcctggtgtcgtactggaccgcctacctcaaggccaaccacccc
gccgagtacatggcggcgctgctcacctcggtgaaggacgacaaggacaagtcggcggtc
tacctcaacgagtgccgccgcatgggcatcaaggtgctcccgcccaacgtcaacgagtcc
gagtccaacttcgccgcgcagggcgacgacgtgatcctcttcggcctctccgcggtgcgc
aacgtcggcaccaacgtcgtggagtcgatcatcaagtgccgcaaggccaaggggaagtac
acgtccttcccggactacctcgacaaggtcgacgcggtcgtctgcaacaagcgcaccacc
gagtcgctgatcaaggccggcgccttcgactccatgggccacacccgcaagggcctcacc
gcccagtacgagccgatgatcgacaacgtggtggcggtcaagcgcaaggaggccgaggga
cagttcgacctcttcggcggcatgggcgaggagcagagcgacgagcccggcttcggcctc
gacgtgcagttcaccgacgacgagtgggacaagacctacctgctcgcgcaggagcgcgag
atgctcggcctctacgtctccgaccacccgctgttcggtctggagcacgtgctgtccgac
aaggccgacgcgggcatctctcagctcaccggcggtgacttcggcgacggcgcggtggtc
accatcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccaccgtggaggacctcgccggctccatcgagtgcatgttcttcccggcgacc
taccaactggtgtcgacgcaactcgtcgaggacgccgtggtgttcgtcaagggccggctc
gacaagcgggaggacgtcccacgcctggtcgcgatggagctccaggtccccgacctgtcc
aacgccggcaccaacgcgcccgtggtgctcaccatcccggccacccgcgtcaccccgccc
atggtcagccggctcggcgagatcctcacccaccaccggggcgacagcgaggtccgcatc
aagctgcagggtccgaccaggacgacggtgctgcgcctcgaccggcaccgggtgaagccg
gatccggccctgttcggcgacctgaaggtgctgctcggaccgtcctgcctggccggctga
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