Streptomyces tendae: F3L20_24800
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Entry
F3L20_24800 CDS
T09112
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
stee
Streptomyces tendae
Pathway
stee00040
Pentose and glucuronate interconversions
stee01100
Metabolic pathways
stee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stee00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
F3L20_24800
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F3L20_24800
Enzymes [BR:
stee01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
F3L20_24800
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
QER88645
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Position
complement(5388091..5389638)
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AA seq
515 aa
AA seq
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MRRAVAVRLSALLAAGALTAATGVALSTTTASAAAGGVTGYATLNGGTTGGAGGQTVRAT
TGTAIHQALCARAGSSTPLTIQVEGTINHANTTKVSGPSCNTAADKIELKQVSNVTIVGV
GNGAVFDQLGIHIREASNIVIQNVTVRNVKKSGSPTSNGGDAIGMESDVRNVWVDHVTLE
ASGGESEGYDGLFDMKDNTQYVTLSYSVLRNSGRGGLIGSSESDRSNGYVTFHHNLYENI
DSRAPLLRGGVAHLYNNHYKRLNESGINSRAGARAKVDNNYFEDSKDVLGTFYTDQAGYW
QVGGNVFDNVTWSSRGGDNNPAGPNPTSNTSVSIPYGYTLDGANCVPNVVAQTAGANKGL
KVSDGSCTPQNPDPTDPGPTDPGEPTEPGPTDPPAGTNLSIGAGADGSSKASGTSYGNVI
DGSTSTYWSPSGTTGSVSVKWGSATTVSRVGIRTASGSGTIGAYRVLNNDTGAVLASGSG
AGVIGFSPVSLKKITFEITSASGTPRIAEFETYAN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagacgagcagtcgccgtacggctctccgcgttacttgccgcgggagccctcacggca
gcgaccggcgtggcgctgtccaccaccaccgcgtccgccgccgccgggggcgtcaccggc
tacgcgaccctgaacggcgggaccaccggcggagcgggcggacagacggtccgcgccacc
accggcaccgcgatccaccaggccctctgcgcccgggccggcagctcgacccccctcacc
atccaggtcgagggcaccatcaaccacgccaacaccaccaaggtgtccggccccagctgc
aacaccgccgccgacaagatcgagctgaagcaggtcagcaacgtcaccatcgtgggcgtc
ggcaacggcgcggtcttcgaccagctgggcatccacatccgcgaggcgagcaacatcgtc
atccagaacgtgacggtcaggaacgtcaagaagtcgggctcgcccacgtcgaacggcggt
gacgccatcggcatggaaagcgatgtcaggaacgtctgggtcgaccacgtcaccctggag
gcgtccggcggtgagtccgagggctacgacggactgttcgacatgaaggacaacacccag
tacgtgacgctgtcgtacagcgtgctgcgcaactccgggcgcggcggcctcatcggctcc
agcgagagcgaccgctccaacgggtacgtgacgttccaccacaatctgtacgagaacatc
gactcccgcgcgcccctgctgcgcggcggcgtcgcgcacctctacaacaaccactacaag
cggctgaacgagtccggcatcaactcccgggccggcgcccgcgccaaggtggacaacaac
tacttcgaggactccaaggacgtcctgggcaccttctacaccgaccaggccggctactgg
caggtcggcgggaacgtcttcgacaacgtcacctggtcctcgcgcggcggcgacaacaac
ccggccgggccgaacccgacgtcgaacacctcggtgagcatcccgtacggctacaccctc
gacggggcgaactgcgtgccgaacgtggtggcgcagacggcgggcgccaacaaggggctg
aaggtctcggacggcagctgcaccccgcagaacccggacccgaccgaccccggcccgacg
gacccgggcgagccgaccgagcccggtcccaccgacccgcccgccggcaccaacctcagc
atcggagcaggcgccgacggctcctccaaggcctccggcaccagctacggcaacgtgatc
gacggcagcacgagcacctactggtcgccctccggcaccaccggatccgtgtcggtgaag
tggggctccgccacgaccgtctccagggtcggcatccgcaccgcgtcgggctcgggcacc
atcggcgcctaccgcgtcctcaacaacgacacgggcgccgtcctcgcctccggcagcggc
gcgggcgtgatcggcttctccccggtctccctgaagaagatcaccttcgagatcaccagc
gcctcgggcaccccgcgcatcgcggagttcgagacgtacgcgaactga
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