Streptomyces tendae: F3L20_29895
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Entry
F3L20_29895 CDS
T09112
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
stee
Streptomyces tendae
Pathway
stee03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stee00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
F3L20_29895
09124 Replication and repair
03420 Nucleotide excision repair
F3L20_29895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stee03021
]
F3L20_29895
03400 DNA repair and recombination proteins [BR:
stee03400
]
F3L20_29895
Enzymes [BR:
stee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F3L20_29895
Transcription machinery [BR:
stee03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
F3L20_29895
DNA repair and recombination proteins [BR:
stee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
F3L20_29895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
ETAA1
AAA_22
YflT
IMD
Motif
Other DBs
NCBI-ProteinID:
QER89518
UniProt:
A0ABX5ZYN5
LinkDB
All DBs
Position
6538039..6539682
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHEQADDCRRVIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVQYSRYPVPHALLVDIADTMDRYGRLSLVKHPAHGLVLTTTDRPVLEEVLR
SKRVAPLVGARIDPDTVLVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELAEDGWA
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGAMAQAKSTTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTKRKGIYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAEQEEKYRFCSTTATKQKVTEAIVRRFAGQQILVIGQYIDQ
LDELGEHLDAPVIKGETSNAQREKLFEAFRQGELSVLVVSKVANFSIDLPEATVAVQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIMDA
DELLADS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggtccgctcatcgtccagtccgacaaaactctgctcctcgaggtcgaccacgag
caggccgacgactgccgtcgcgtcatcgcgccgttcgccgaactggaacgggcccccgaa
cacatccacacctaccgcgtgaccccgctcggcctgtggaacgcgcgcgccgccggccac
gacgccgagcaggtcgtggacgcgctggtgcagtacagccgctacccggtgccgcacgct
ctgctcgtcgacatcgccgacaccatggaccgctacggccggctcagcctggtcaagcac
cccgcgcacgggctcgtcctcaccaccaccgaccgcccggtcctcgaggaggtactgcgc
tccaagcgcgtcgccccgctcgtcggcgcccggatcgacccggacacggtcctggtgcac
ccctcggagcgcgggcagatcaagcagaccctgctgaagctgggctggccggccgaggac
ctcgccgggtacgtggacggcgaggcgcacccgatcgagctggccgaggacggctgggcg
ctgcgcccgtaccagaagcaggccgtggagaacttctggcacggcggctccggcgtggtc
gtcctgccctgcggcgccggcaagacgctggtcggcgcgggcgcgatggcgcaggcgaag
tccaccacgctgatcctcgtcaccaacacggtctcggcccggcagtggaagcacgagctg
gtgaagcggacgtcgctcaccgaggacgagatcggcgagtacagcggcacgaagaaggag
atccgccccgtcaccatcgccacctaccaggtgctgacgacgaagcggaagggcatctac
ccccacctggagctgttcgactcccgggactggggtctgatcgtctacgacgaggtgcat
ctgctgcccgcgcccgtcttcaagttcaccgccgacctccaggcccggcgccggctcggc
ctgacggcgaccctggtccgtgaggacggccgcgagtcggacgtcttctcgctgatcggc
ccgaagcggttcgacgcgccgtggaaggagatcgaggcgcagggctacatcgccccggcc
gactgcgtcgaggtccgggtgaacctcaccgactccgagcggctggcgtacgcgacggcc
gagcaggaggagaagtaccgcttctgctcgacgaccgccaccaagcagaaggtgacggag
gcgatcgtccgccggttcgccgggcagcagatcctggtcatcgggcagtacatcgaccag
ctcgacgaactgggcgagcacctggacgcgccggtcatcaagggcgagacgtccaacgcc
cagcgggagaagctgttcgaggcgttccggcagggcgagctgagcgtgctggtggtgtcg
aaggtcgcgaacttctcgatcgacctgccggaggcgacggtcgccgtgcaggtgtccggc
accttcgggtcgcggcaggaggaggcgcagcggctcggccgggtgctgcggccgaaggcg
gacgggcaccaggcgcacttctactccgtggtcgcccgcgacaccatcgaccaggacttc
gcggcgcaccgccagcggttcctggccgagcaggggtacgcctaccggatcatggacgcg
gacgagctcctcgcggacagctga
DBGET
integrated database retrieval system
