Streptomyces tendae: F3L20_30005
Help
Entry
F3L20_30005 CDS
T09112
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
stee
Streptomyces tendae
Pathway
stee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F3L20_30005 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stee03019
]
F3L20_30005 (groL)
03110 Chaperones and folding catalysts [BR:
stee03110
]
F3L20_30005 (groL)
03029 Mitochondrial biogenesis [BR:
stee03029
]
F3L20_30005 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stee04147
]
F3L20_30005 (groL)
Enzymes [BR:
stee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
F3L20_30005 (groL)
Messenger RNA biogenesis [BR:
stee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
F3L20_30005 (groL)
Chaperones and folding catalysts [BR:
stee03110
]
Heat shock proteins
HSP60 / Chaperonin
F3L20_30005 (groL)
Mitochondrial biogenesis [BR:
stee03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
F3L20_30005 (groL)
Exosome [BR:
stee04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
F3L20_30005 (groL)
Exosomal proteins of other body fluids (saliva and urine)
F3L20_30005 (groL)
Exosomal proteins of breast cancer cells
F3L20_30005 (groL)
Exosomal proteins of colorectal cancer cells
F3L20_30005 (groL)
Exosomal proteins of bladder cancer cells
F3L20_30005 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
CbiA
DUF4844
Motif
Other DBs
NCBI-ProteinID:
QER89540
UniProt:
A0ABX5ZXY4
LinkDB
All DBs
Position
complement(6559829..6561451)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAALLEQAKDVETKEQIASTASISAADVQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMEAVLDDPYILIANSKISSVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDIGILTGGEVIS
EEVGLKLENATIDLLGKARKVVITKDETTIVDGAGSADQVQGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SQVFEKLELEGDEATGANAVKLALEAPLKQIAVNGGLEGGVVVEKVRNLTVGHGLNAATG
EYVDMIAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAPAGGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcggcatgaac
cagctcgcggacgccgtgaaggtgacgctcggccccaagggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgcaggtgacggtacgaccaccgcgaccgttctcgcccaggccctggtcaag
gagggcctgcgcaacgtcgccgccggcgccaacccgatggccctgaagcgcggtatcgag
aaggccgtcgaggccgtctccgccgccctgctggagcaggcgaaggatgtcgagaccaag
gagcagatcgcttccacggcctccatctccgccgctgacgtccagatcggtgagctcatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcccagacc
ttcggtctggagctggagctcaccgagggtatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgacatggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
gccaactccaagatctccagcgtaaaggacctgctcccgctcctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtggtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggc
gaccgccgcaaggcgatgctgcaggacatcggcatcctcaccggcggcgaggtcatctcc
gaggaggtcggcctcaagctggagaacgccaccatcgacctgctgggcaaggcccgcaag
gtggtcatcaccaaggacgagaccaccatcgtcgacggtgccggctccgccgaccaggtc
cagggccgcgtgaaccagatccgcgccgagatcgagaacagcgactcggactacgaccgc
gagaagctgcaggagcgcctggcgaagctcgccggcggtgtcgcggtcatcaaggccggt
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtgcgcaac
gccaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctgcaggcc
tcccaggtgttcgagaagctggagctcgagggtgacgaggcgaccggtgccaacgccgtg
aagctcgccctggaggccccgctgaagcagatcgccgtcaacggtggtctcgaaggcggc
gtcgtcgtggagaaggtccgcaacctcacggtcggccacggtctgaacgccgcgaccggc
gagtacgtcgacatgatcgccgaaggcatcatcgacccggcgaaggtgacccgttccgcg
ctgcagaacgccgcctccatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgcggccccggccggcggcggcatgccgggcggtgacatggacttc
tga
DBGET
integrated database retrieval system
