KEGG   Sinorhizobium terangae: QA637_00835
Entry
QA637_00835       CDS       T09097                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
steg  Sinorhizobium terangae
Brite
KEGG Orthology (KO) [BR:steg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:steg03400]
    QA637_00835
Enzymes [BR:steg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QA637_00835
    5.6.2.6  RNA 3'-5' helicase
     QA637_00835
DNA repair and recombination proteins [BR:steg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    QA637_00835
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII PSD4 B12-binding
Other DBs
NCBI-ProteinID: WFU48001
LinkDB
Position
complement(176210..178756)
AA seq 848 aa
MFPVNRIDSPLPESDALTLPAPFLQWFAEKGWRPRAHQLELLSRAEAGESTLLIAPTGAG
KTLAGFLPSLVALTRRGKVPPGSPFTGIHTLYISPLKALAVDIERNLMKPVAEMGLPVRI
ENRTGDTPPGKRQRQKLYPPDILLTTPEQLALLIADGEAERFFKDLRYVVLDELHSLVTS
KRGHLLSLGLARLRRLAPDLQTIGLSATVAEPMDLQRWLVAQSEEQENHAGLITVAGGAK
PEISILRTDEHVPWAGHSARYAIADVYTAIKDHGTTLLFVNTRSQAEMLFQELWTINDDN
LPIALHHGSLDVAQRRKVEAAMSENRLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRL
AQRIGRANHRMDEPSRAILVPANRFEVMECQAALDANYIGAQDTPPVGRGALDVLAQHVL
GIACAKPFDAVELHREITSAAPYMDLSWETFERIVDFVATGGYALRTYERYARIRKTKDG
LWRVSNPMVAQQYRLNVGTIVESPMLNVRMVKRNARGSLGRGGMTLGKVEEYFLDMLSPG
DTFLFSGKVVRFEGIRENECLVSQAFSFDPKVPSYAGGKFPLSTYLAAQVRKMLADPTGR
ASLPDQVRDWLALQKDVSMLPREDELLIETFPRGSRHYMVIYAFEGRLAHQTLGMLLTRR
LDRAGLKPLGFVATDYSLAVWGLDDLSSAFRARQPSLAQLFDEDMLGDDLEAWLNESFLL
KRTFRNCAVIAGLIDQRHPGKEKTGRQITVSADLIYDVLRAHEPDHILLEATRNDAATGL
LDIGRLGSMLKRIKGHITHRRLDHISPLAIPVMLEIGKEVIHGEAHDFLLSEAADDLMNE
AMGAGHDG
NT seq 2547 nt   +upstreamnt  +downstreamnt
ttgttccccgtgaacaggatcgattctccattgcccgaaagcgacgcgctgacgttgccg
gcgccgtttctccagtggttcgcggagaaaggctggcgaccccgcgcccaccagctcgaa
ctcctgtcacgcgcagaggctggagaaagtacgcttctgatcgcgccgaccggggcgggc
aagacgctcgccggatttctgccgtcgttggtcgcgcttacccggcgcggcaaggtcccg
cccggctcaccattcaccggcatccacacgctctacatatcgccgctgaaggcgctcgcg
gtcgacatcgagcgcaacctgatgaagccggtggcggagatgggtctgccggtcaggatc
gagaaccggacgggcgacacgccgccgggcaagcgacagcgccagaagctctatccgccc
gatatcctcctgaccacgccggaacagctcgccctcctcatcgccgatggcgaggcggag
cgcttcttcaaggatctgcgctatgtcgtgctcgacgagttgcactcgctggtgacctcg
aagcgcgggcatctgctctcgctcggtctggcacgactgcgccggctggcgcccgacctc
cagacgatcggcctttcggcaaccgttgccgagccgatggacttgcagcgctggctcgtg
gcccagagcgaagaacaggagaatcacgccggtctgatcaccgttgccggcggcgcgaag
ccggaaatttcgatcctgcgcaccgacgagcacgtgccttgggcaggacattcggcgcgc
tatgcgatcgccgacgtctataccgcgatcaaggatcacggcacgacactgcttttcgtc
aacacccgcagccaggcggaaatgctgtttcaggaactctggacgatcaacgacgataac
ctgccgatcgcgctgcatcacggttcgctcgatgtcgcgcaacgccgcaaggtcgaggcc
gccatgtccgaaaaccggctacgcgccgtcgtcgccacctcgacgctcgatcttggcatc
gactggggcgatgtcgatctcgtggtccatgtcggcgcccccaaaggggcgagccgtctt
gcccaacgcatcggccgcgccaaccatcggatggacgagccaagccgggcgatcctcgtg
cccgccaaccgcttcgaagtgatggaatgccaggcggcgctcgacgccaattatatcggc
gcgcaggatacgccgccggtcggcagaggcgcgctcgacgtgctcgcccaacatgtcttg
ggaattgcctgcgcgaagcccttcgacgctgtcgagcttcatcgggagatcaccagcgcg
gcgccctacatggacctttcctgggagactttcgagcgcatcgtcgatttcgtcgccacc
gggggctacgcacttcgcacctatgaacgctacgcccgaatccgcaagacgaaggacggg
ctctggcgggtgtcgaacccgatggtcgctcagcaatatcgcctcaatgtcgggactatc
gtcgaatccccgatgctgaacgtgcgcatggtcaagcgcaatgcgcgcggctcgcttggc
cggggcggcatgacgcttggcaaggtggaggaatatttcctcgatatgctgtcgccgggc
gacacatttctcttttccggcaaggtcgtgcgtttcgagggcatccgcgaaaacgaatgc
ctcgtctcccaggccttctccttcgacccgaaggtgccgagctatgccggcggaaaattc
ccgctctccacctatctcgcggcgcaggtccgcaagatgctagccgatccgaccggccgc
gcctcattgccggaccaggtgcgcgactggctggcgttgcagaaggacgtctccatgctg
ccgcgcgaggacgagctgctgatcgagacttttccgcgcgggagccgccactacatggta
atctacgccttcgaggggcggcttgcgcaccagacgctcggcatgctcttgacccgccgc
ctcgaccgcgccggcctgaaaccgctcggcttcgtcgccaccgactattcgctcgccgtc
tggggtctcgacgatctcagcagcgccttccgggcgcgtcagccctcgctcgcgcaactc
ttcgacgaagacatgctcggcgacgacctcgaggcttggctcaacgaatccttcctcttg
aagcgcaccttccgcaactgcgcggtcatcgccggattgatcgaccagcgccatccgggc
aaggagaaaaccggacgacagattaccgtttcggccgatctcatttacgacgtattgcga
gcgcacgagccggaccacatcttgctggaggcaacacgcaacgacgccgcgacgggactt
ttggacatcggccggctcggatctatgctgaagcgaatcaaggggcatatcacccaccgc
cgactcgatcatatctcgccgctcgccatccccgtgatgctggagattggcaaggaagtg
atccacggagaggcccacgacttcctgctgtcggaggcggccgatgacctgatgaacgag
gcaatgggcgccggccacgatggatag

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