Sinorhizobium terangae: QA637_04910
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Entry
QA637_04910 CDS
T09097
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
steg
Sinorhizobium terangae
Pathway
steg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
steg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QA637_04910 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
steg03021
]
QA637_04910 (rpoB)
03400 DNA repair and recombination proteins [BR:
steg03400
]
QA637_04910 (rpoB)
Enzymes [BR:
steg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QA637_04910 (rpoB)
Transcription machinery [BR:
steg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QA637_04910 (rpoB)
DNA repair and recombination proteins [BR:
steg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QA637_04910 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
WFU48758
LinkDB
All DBs
Position
1037632..1041774
Genome browser
AA seq
1380 aa
AA seq
DB search
MAQTLSFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPKGGRPDEGLQAVFK
SVFPIKDFSGASMLEFVSYEFEPPKFDVEECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQNVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVHARIDRRRKIPVTSLLMALGMDGEEILDTFYTKSLYQR
DGEGWRVPFQPDALKGQKAITDMIDADTGEVVVEAGKKLTPRLLRQLQEKGLKALKATDD
DLYGNYLAEDVVNYGTGEIYLEAGDEIDEKTLPVILSAGFDEIPVLDIDHINVGAYIRNT
LAADKNENRQDALFDIYRVMRPGEPPTMDSAEAMFNTLFFDAERYDLSAVGRVKMNMRLD
LDVPDTVRTLRKEDILAVVKMLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKIVDGKVTSDVVYLSAMEEAKYHVAQANSVLNDDNSFAEEFVVCRHAGEVMLAPRDNI
NLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPVVAR
DSGAAIAARRGGVVDQVDATRIVIRATEDLDPSKSGVDIYRLQKFQRSNQNTCVNQRPLV
TVGDVLNKGDIIADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILLSERIVRDDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYARLVDMLRGHVAVAGPKGFKKGTELSNAVVSEYPRSQWW
MFAVEDEKAQGEIEALRAQYDESKSRLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRIVPIEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILETHLG
WACAGMGKKIGAMLDAYHENGDIAPLRATIDDVIGSGPKGEPIKNYDDESVVRLAEQTRR
GVSIATPVFDGAVEADVNEMLNKAGLKVTGQSTLFDGRTGEPFDRQVTVGYIYMLKLNHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELENSKVDDLSAAAQLPDAAE
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctttcgtttaacggtcgcaggcgcgtacgcaagttttttggtaaaatt
ccagaagtcgcagagatgccgaacctcattgaggttcagaaggcgtcctacgaccaattt
ctgatggttgaagagcccaagggcggccgcccggacgaggggcttcaggccgttttcaag
tcggtatttccgatcaaggatttctcgggcgcttccatgctcgaattcgtgtcctacgag
ttcgagccgccgaagttcgacgtcgaggaatgccgccagcgtgacctgacctatgcggcg
ccgctgaaggtgacgctgcggctgatcgtgttcgatattgacgaggacacgggcgcaaag
tcgatcaaggacatcaaggaacagaacgtctacatgggcgacatgccgctcatgacggac
aacggtaccttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcatcgctca
cccggcgtgttcttcgatcacgacaagggcaagagccattcgtccggcaagctgctcttc
gcagcgcgcgtcattccgtatcgcggctcgtggctcgacatcgagttcgacgccaaggac
atcgtccatgcccgcatcgaccgtcgccgcaagattccggtgacctcgcttttgatggcg
ctcggcatggacggcgaagagatcctcgacaccttctacacgaaatcgctctaccagcgc
gacggcgaaggttggcgcgtgccgttccagccggatgcgctcaagggccagaaggcgatc
accgacatgatcgacgccgataccggcgaagtcgtcgttgaagccggcaagaagctcacg
ccgcgcctgctgcgccagctgcaggagaaggggctgaaggctctcaaggccaccgatgac
gatctctatggcaattacctcgccgaagacgtcgtcaactatggtacgggcgagatctat
ctcgaagccggcgacgagatcgacgagaagacgcttcccgtcatcctttcggcaggcttc
gacgaaatcccggttctcgacatcgaccacattaatgtcggtgcctatatccgcaacacg
cttgccgccgacaagaacgaaaaccgccaggacgcgctgttcgacatctatcgtgtcatg
cgccccggcgaaccgccgaccatggattctgctgaagccatgttcaacacgctgttcttc
gacgccgagcgctacgatctctcggcggtcggccgcgtgaagatgaacatgcgtctcgac
ctcgacgttccggataccgtccgcacgctccgcaaggaagacattcttgctgtcgtcaag
atgctggtcgaactgcgtgacggcaagggcgagatcgacgacatcgacaacctcggcaac
cgccgcgtacgctcggtcggcgagctcatggagaaccagtatcgccttggtctcctgcgc
atggagcgtgcgatcaaggaacgcatgtcctcgatcgagatcgacacggtcatgccgcag
gatctgatcaacgcgaagccggcggccgccgccgttcgcgagttcttcggctcgtcgcag
ctgtcgcagttcatggaccaggtgaacccgctttcggaaatcacccacaagcgtcgtctt
tcggctcttggcccgggtggtctcacccgcgaacgtgcgggcttcgaagtgcgcgacgtt
catccgacgcattacggccgcatctgcccgatcgaaacgccggaaggcccgaacatcggt
ctgatcaattcgctcgcaaccttcgcccgcgtcaacaagtacggctttatcgagagcccg
taccgcaagatcgtcgacggcaaggtcaccagcgacgtcgtctatctgtcggcgatggaa
gaggcgaaataccacgtcgctcaggctaactcggtgctgaacgacgacaactccttcgcg
gaagaattcgtcgtctgccgtcatgccggcgaagttatgctggctccgcgcgacaacatc
aacctgatggacgtttcgccgaagcagctcgtgtccgtcgcggcggctctcatcccgttc
ctcgagaacgacgacgccaaccgtgcgctgatgggctcgaacatgcagcgccaggccgtg
ccgctgctgcgtgcggaagcgcccttcgtcggcaccggcatggagccggtcgtcgcccgc
gactccggtgctgcgatcgccgcccgccgcggcggtgtcgtagaccaggtcgatgcgacg
cgtatcgttatccgcgccaccgaggacctcgatccgtcgaagtccggcgtcgatatctat
cgcctgcagaaattccagcgttcgaaccagaacacctgcgtcaaccagcgtccgctggtc
accgttggtgacgttctgaacaagggcgacatcatcgcggacggtccttcgaccgacctc
ggcgatctggcgctcggccgcaacgcgctcgtcgcgttcatgccgtggaacggctacaac
tacgaagactcgatcctgctttccgagcggatcgtgcgtgacgacgtgttcacgtccatc
cacatcgaagaattcgaagtgatggcgcgagacaccaagcttggtccggaagaaatcacc
cgcgacattccgaacgtctcggaagaagcgttgaagaacctcgacgaagccggtatcgtc
tatatcggtgccgaagttcagccgggcgatatcctcgtcggcaagatcacgccgaagggc
gaaagcccgatgacgccggaagaaaagcttctgcgcgccattttcggtgagaaggcctcg
gatgtccgcgacacgtccatgcgcatgcctccgggcaccttcggcacggtcgtcgaagtg
cgcgtctttaatcgccacggcgtggagaaggacgagcgcgccatggcgatcgagcgcgag
gagatcgagcgcctcgccaaggaccgtgacgacgaacaggcgatcctcgaccgcaacgtc
tatgcacgtctggtagacatgctgcgcggtcacgttgccgtggctggtccgaagggcttc
aagaagggcaccgagctttcgaacgccgtcgtcagcgaatatccgcgctcacagtggtgg
atgttcgccgtcgaggatgaaaaggctcagggcgagatcgaagcactccgcgcccagtac
gacgaatccaagtcgcgcctcgaacagcgcttcatggataaggtcgagaaggtccagcgc
ggcgatgaaatgcctccgggcgtgatgaagatggttaaggtcttcgtcgcggtgaagcgc
aagatccagccgggcgacaagatggccggccgccacggcaacaagggcgtcgtatcgcgt
atcgtgccgatcgaagacatgccgttcctggaagatggcacccatgtcgacgtggtgctg
aacccgctcggcgtgccgtcgcgcatgaacgtcggtcagatcctcgaaacccacctcggc
tgggcttgcgccggcatgggcaagaagatcggcgcgatgctggatgcgtatcacgagaac
ggcgacatcgctccgcttcgcgcaacgatcgatgacgtcatcggatccggtccgaagggc
gagccgatcaagaactacgacgacgagtcggtggttcggcttgccgagcagacccgccgc
ggcgtatcgatcgcaacgccggtcttcgacggtgccgtcgaggccgatgtgaacgagatg
ctgaacaaggcaggtctcaaggtgaccggccagtcgacgctcttcgacggccgtaccggc
gaaccgttcgatcgtcaggtgaccgtgggctacatctacatgctgaagctcaaccacttg
gtggacgacaagatccacgcccgctcgatcggcccttactcgcttgttacgcagcagcca
ctgggcggcaaggcgcagttcggcggtcagcgtttcggcgaaatggaggtctgggcgcta
gaagcttacggcgccgcctacacgctgcaggaaatgctgacggtcaagtccgacgacgtt
gctggccgcaccaaggtctacgaagcaatcgtccgcggcgacgacaccttcgaggcgggc
attccggagagcttcaacgttctcgtcaaggaaatgcgctcgctgggccttagcgtcgaa
ctcgaaaactcgaaagtcgacgacctcagtgccgcggcgcaactgccggacgcagcagag
taa
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