Sinorhizobium terangae: QA637_11565
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Entry
QA637_11565 CDS
T09097
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
steg
Sinorhizobium terangae
Pathway
steg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
steg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QA637_11565 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
steg03021
]
QA637_11565 (rpoD)
Transcription machinery [BR:
steg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QA637_11565 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
DUF5856
Relaxase_C
Phage_DsbA
DUF3106
DUF4351
Imm3
Motif
Other DBs
NCBI-ProteinID:
WFU46535
LinkDB
All DBs
Position
complement(2421751..2423811)
Genome browser
AA seq
686 aa
AA seq
DB search
MATKVKENEEADVEREGAPDGPLLDLSDDAVKKMIKAAKKRGYVTMDELNSVLPSEEVTS
EQIEDTMAMLSDMGINVIEDEEAEEAAAGGDDEDSGDEGDGEGGELTTSSGTALATGKKK
EPTDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQALIIWR
DELNEGQTLLREIIDLETTYSGPEAKAAPQFQSPEKIEADRKAAEEKEKVRKTRAAAAND
DDITNVGGDGQPPEEEEEDDDESNLSLAAMEAELRPQVMETLDIIAETYKKLRKLQDQQV
EARLAATGTLSPAQERRYKELKDELIKAVKSLSLNQNRIDALVEQLYDISKRLMQNEGRL
LRLAESYGVKRDSFLEQYSGAELDPNWMKSISNLAGKGWKEFAKAENQTIRDIRQEIQNL
ATETGISIAEFRRIVSMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQE
GNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTS
RQMLHEIGREPTPEELAEKLAMPLEKVRKVLKIAKEPISLETPVGDEEDSHLGDFIEDKN
ALLPIDAAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERI
RQIEAKALRKLKHPSRSRKLRSFLDS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaaagtcaaagaaaacgaagaagcagacgtagaacgcgaaggcgctcctgac
ggtccgcttctcgatctttccgacgacgctgtcaagaagatgatcaaggccgccaagaag
cgcggctacgtgacgatggacgaattgaactcggtcctgccgtcagaggaagtcacctcc
gaacagatcgaagacacgatggccatgctctccgacatgggcatcaacgtcatcgaggat
gaagaagccgaggaagccgccgccggcggcgacgacgaagacagcggcgacgagggtgac
ggcgagggcggtgaactcaccacctccagcggcaccgcgcttgcgaccggcaagaagaag
gaaccgaccgatcgcaccgacgatccggtgcgcatgtatctgcgcgagatgggttcggtc
gagcttctctcccgcgaaggcgaaattgcgatcgccaagcgcatcgaagccggccgcgag
acgatgattgccggtctctgtgagagcccgcttaccttccaggcactgatcatctggcgc
gacgaactgaacgaaggccagacgcttctgcgcgagatcatcgatctcgaaacgacctat
tccggtcccgaggcgaaggctgccccacagttccagagcccggaaaagatcgaggctgac
cggaaggccgccgaagagaaggaaaaggtgcgcaagacgcgcgcggccgcggctaatgac
gacgacatcaccaatgtcggcggcgatggccagccgcccgaggaagaggaagaggacgat
gacgaatcgaacctctcgctcgccgcgatggaagcggaactgcgcccgcaggtgatggaa
acgctcgacatcatagccgagacctacaagaagctccgcaagctgcaggaccagcaggtg
gaagcacgccttgccgcgacgggcacgctgtcgccggcgcaggagcgccgctacaaggag
ctgaaggacgagctgatcaaggcggtgaagtcgctgtcgctcaaccagaaccgcatcgat
gcgctggtcgagcagctttacgacatttcgaagcgcctgatgcagaacgagggccggctg
ttgcgccttgccgaatcctacggcgtcaagcgcgactcgttcctggaacagtattcgggc
gccgagctcgacccgaactggatgaagtcgatcagcaatctcgccggcaagggctggaag
gagtttgccaaggccgagaaccagacgatccgggatatccgccaggagatccagaatctc
gcgaccgaaaccggcatttccatcgccgagttccgccgcatcgtttccatggtccagaag
ggcgagcgcgaagcgcgcatcgccaagaaggagatggtcgaggccaacctgcgtctcgtc
atttcgatcgccaagaagtacacgaaccgcggcctgcagttcctggacctcatccaggaa
ggcaacatcggcctgatgaaggcggtcgacaagttcgagtaccgccgcggctacaagttc
tcgacctatgccacctggtggatccggcaggcgatcacccgttcgatcgccgaccaggca
cgcacgatccgcattccggtgcacatgatcgagacgatcaacaagatcgttcgtacctcg
cgccagatgctgcacgagatcggccgcgagccgacgccggaggaattggccgaaaagctt
gccatgccgctcgagaaggtgcgcaaggtgctgaagattgccaaggaaccgatctcgctc
gaaacgccggtcggtgacgaggaagattcacatctcggcgatttcatcgaggacaagaac
gcgctcttgccgatcgacgccgccattcaggcgaacctgcgtgaaacgacgacccgcgtt
ctcgcttcgctgacgccgcgcgaagagcgtgtgctgcgcatgcgcttcggcatcggcatg
aacacggaccacacgctcgaagaggtcggccagcagttctcggtcacccgcgaacgtatc
cgtcagatcgaagcgaaggcgctgagaaagctcaagcacccgagccgttcgcgcaagctg
cgctcgttcctcgacagctaa
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