Sinorhizobium terangae: QA637_16875
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Entry
QA637_16875 CDS
T09097
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
steg
Sinorhizobium terangae
Brite
KEGG Orthology (KO) [BR:
steg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
steg03400
]
QA637_16875 (addA)
Enzymes [BR:
steg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QA637_16875 (addA)
DNA repair and recombination proteins [BR:
steg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QA637_16875 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
NPHP3_N
DEAD
Motif
Other DBs
NCBI-ProteinID:
WFU47515
LinkDB
All DBs
Position
complement(3580653..3584219)
Genome browser
AA seq
1188 aa
AA seq
DB search
MRDDAFGPRETTPRAWLDWTTERQSLASDPARSAWVSANAGSGKTHVLTQRVIRLLLAGC
RPSAILCLTYTKAAASEMSNRVFERLAEWATLDDTTLEKRIEAIEGVRPSAVKIQEARRL
FAAALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDSAAAVLLADARRALLAAT
AGDDRELADAFATVLDLADDTGLERLLATIVANRTPIQAFLDRASARGGLDTHLRAALAI
APGESTESVLGKVWPLAGLNGAVLEQYLDLAARKGGAKPSEFAEGLKAVARLSDPEERYR
SLLGLFFNGGGKPRADSTFLNAAMRREAPELAPLVEQARDHVVAYVDRLSIVRMYEATRA
ALTLAERLNRDYEEIKKARSQLDFEDLINRTAALLSRGDVGAWVHYKLDQGIDHILVDEA
QDTSPAQWTIIQALAADFFAGETARADERTIFAVGDEKQSIYSFQGARPERFSRESIVTE
RRVRAGGKYFSPIRLQLSFRSTIDVLSAVDTVFANKGNAKGLSAKDEAIVHASNRIGHPG
AVDIWDVIAPEPVPAEEEWTAAFDATPERAPANILARRIASVLEDWIGKETVIEKGVRRP
MRPGDVIVLVRKRDAFVNALTRALKRRNNIPVAGADRLVLTSHIAIQDLMALGRFALLPD
DDLSLAALLKSPLINLGEDDLFELAAGRAETESLWQRLQSLGVDETSRYRPVAGRLSQYS
DLARQMLPHDFYARILGVLGGRAAFLARLGSEVSDILDEFLTFALDHERAGLPGLQAFIS
TLEIEAPTVKREQDKERDEVRVMTVHAAKGLEAPVVFLVDGGGKAFNSQHVPDLRLFEKQ
RPDGSTVTVPVWRAPGSGTNSLLNADNARLKALAEEEYRRLLYVGMTRAADRLVICGYRG
QRENTDTWHAMVQGTLAQDLKGRGTPMVFRAGGEEWTGHAWRETHPHIDTPVADGNEAEG
ERMVPGLPATLSAPLPPPRRLPRPLTPSGTGIVFDEPDSESIVGSALFAEKAAPNRSLLR
GAILHRLLQVLPSVDAAERRAAADRYLLRSVPRWSEPERRALADAVMDVLDHPDLTTLFA
AHSRPEVSVMGTLTLGGREFAVSGRVDRLSVSGDMVTIADFKTNREVPKSLAEVPPVYST
QLAIYRELLKPLYPGRRFRCALIFTEGPTIQVLPDAMLDRSLEELATK
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgagggatgacgctttcggacctcgggaaacgacccccagggcttggctcgactggacg
acggagcggcaatcgcttgcttccgatccggcgcgctcggcctgggtttccgccaacgcc
ggatcgggcaagacgcatgtcctgacgcagcgcgtcatccgcttgctgctcgccggctgc
cgcccttccgcgatcctgtgtctcacctatacgaaggccgccgcttcggaaatgtcgaac
cgggtgttcgagcgcctggccgaatgggcgacgcttgacgacaccacccttgagaaacgc
atcgaagcgatcgaaggcgtccggccctcggccgtgaaaatccaggaggcacggcggttg
ttcgccgccgcccttgagacgcccggcggcctgaagatccagacgatccacgccttctgc
gaagcgctgctgcatcagtttccgctcgaagccaatgtcgccgggcatttttccgtgctc
gacgacagcgccgccgccgtcctgctcgccgatgcccggcgcgcgttgctggcggccacg
gcgggcgacgacagagagctagccgacgccttcgccacggttctcgatctcgccgacgat
accggtcttgaacggctgctggcgacgatcgtcgccaaccgtacgcctatccaagccttt
ctcgatcgcgcctcggcacggggcggactggacacgcacctgcgcgcagcgctcgcgatt
gcgccgggcgagtccaccgaaagcgtgctcggtaaggtctggccactggccgggctgaat
ggggcggtcctggagcaatatctcgacctcgcagcacgcaagggcggcgccaagccttcc
gagtttgcggaaggcttgaaggcggtcgcaaggctcagcgatcccgaggaacgctaccga
agcctgcttgggctcttcttcaacggcgggggcaagccgagggccgactcgacctttctc
aatgcggcgatgcggcgcgaggcgcctgagctcgcacctctggtagaacaggcgcgcgat
catgtcgtggcgtacgtggatcggctcagcatcgtccggatgtacgaggcgacacgtgcc
gctctcaccctcgctgaaaggctcaaccgcgattacgaggaaatcaagaaggcgcgcagc
caactcgacttcgaggatctgatcaaccgcacggcagcgcttctctcgcgcggcgatgtc
ggcgcctgggtccactacaagctcgaccagggcatcgaccatattctcgtcgacgaggca
caggacacgagccctgcgcaatggacgatcatccaggcgcttgccgccgatttcttcgcc
ggcgagacggcgagagccgacgagcggacgatcttcgcagtcggcgacgagaagcagtcg
atctattcgttccagggtgcgcggccggagcgcttctcccgcgagagcatcgtgacggag
cggcgggtacgcgctggcggaaaatacttcagcccgatccgcctgcagctttccttccgg
tcgacgatcgacgtcctgtcggccgtcgacacggtctttgccaacaagggaaatgccaag
gggctcagcgcgaaggacgaggcgatcgtccatgcctcgaaccggatcgggcaccccggc
gcggtcgacatatgggacgtgattgcgcccgaaccggtgcctgcggaagaggagtggaca
gcagcgttcgatgcgacgcccgagcgcgcgccggccaacattctggctcgacgcatcgcc
tcggttctcgaggactggatcggcaaggagacggtcatcgagaagggcgttcgccgaccg
atgcggccgggtgacgtcatcgtccttgttcgcaagcgtgacgccttcgtcaacgctttg
acgcgggccctgaagcgcagaaacaacataccggtggcgggtgccgaccgcctggtattg
accagccacattgcgatccaggatctgatggcgctcggccgctttgcgctgctgcccgac
gacgacctttctctcgccgcgctgttgaaaagcccgctcatcaatctcggtgaggacgat
cttttcgagcttgcggcgggaagggcggaaaccgagagcctctggcagcgcctgcaaagc
ctcggcgtcgacgagacgagccgataccgcccggtcgcaggcaggctctcgcaatattcc
gatctcgcccgccagatgctgccgcacgacttctacgcccgcatcctcggcgttctcggc
ggcagggcggctttcctcgcccggctgggcagcgaagtcagcgacattctcgatgaattc
ctgacctttgcactcgatcacgaaagggccggtttgcccgggctgcaggccttcatctcg
acgctcgagatcgaagcgccgacggtcaagcgcgaacaggacaaggagcgggacgaagtg
cgcgtcatgaccgtgcacgcggcaaagggcctggaggcgccggtcgtcttcctcgtcgac
ggcggtggcaaggccttcaacagccagcatgttcccgatctccgccttttcgaaaagcaa
cggcccgacggttccaccgtcaccgtgcctgtctggcgggcgcccggctccggaacgaat
tccctgctcaacgccgacaatgcgcgcctgaaggcgctggcggaagaggaataccgacgt
ctgctctatgtcggcatgacgcgcgccgcagaccggctcgtcatttgcggctatcgcggg
cagagggagaacaccgatacctggcacgccatggtccaggggacgttggcgcaggacctt
aagggacgcggaacgccgatggtgttccgcgcgggtggtgaagaatggacgggccacgcg
tggcgcgagacgcatccccatatcgacacccctgttgcagatggcaatgaagccgaggga
gagcgcatggtgccgggcctgcccgccacgctttccgccccgttgccgccgccgcgtcgg
ctgccgcggccgctaaccccatcgggcaccggcattgtcttcgacgagccggacagcgaa
tcgatcgtcggatcggcgctcttcgcggaaaaggcggcgcccaatcgctcgctgctgcgt
ggcgcgatccttcatcgcctgctgcaggttctcccgtcggtcgatgccgctgaacgccgc
gcggcggcggaccgctatctgctgcggtcggtcccacgctggtccgagccggagcgccgg
gctcttgccgatgccgtgatggatgtgctggaccaccccgacctcacgacgctttttgcc
gcgcacagccggccggaagtctccgtcatgggaacgctcaccctcggcgggcgcgagttc
gcggtgtcgggccgcgtcgaccgactatccgtttccggagacatggtgacgattgcggac
ttcaagacgaatcgcgaggtgccgaagtcgctcgcggaggtgccgcctgtctacagcaca
cagcttgccatctacagggaactgctcaagccgctctatccggggcgacgcttccgttgc
gcgctgatcttcaccgagggaccgacgatccaggtgcttcccgacgcgatgctggacagg
agccttgaagagctcgcgacaaagtga
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integrated database retrieval system
