Sinorhizobium terangae: QA637_17040
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Entry
QA637_17040 CDS
T09097
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
steg
Sinorhizobium terangae
Brite
KEGG Orthology (KO) [BR:
steg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
steg03019
]
QA637_17040 (hrpB)
Enzymes [BR:
steg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QA637_17040 (hrpB)
Messenger RNA biogenesis [BR:
steg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QA637_17040 (hrpB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
WHD_HA2
ResIII
nSTAND3
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WFU47548
LinkDB
All DBs
Position
complement(3620802..3623261)
Genome browser
AA seq
819 aa
AA seq
DB search
MRDLPPLPVRDILPRVGEVLKEAPSVVLSAPPGAGKTTLVPLFLLDQPWLNGGKVILLEP
RRLAARAAAGRMAELLEEKVGETVGYRMRLDNRISARTRIEVVTEGVFSRMILDDPELSG
VSAVLFDEFHERSLDADFGLALALDVQSALRDDLKIVVMSATLDVGRVARLLGDAPVIES
QGRSFPIDIRYEERNAGESAENAVARAIVDAHRSEAGSILAFLPGQGEITRTAERLAGRF
DEKTAVVPLYGNLSQKEQDAAIRPAPAGTRKIVLATSIAETSITIDGVRIVVDSGLQRLP
VFEASTGITRLETVRVSRASADQRAGRAGRTEPGIAIRLWHPGQTAALVAFTPPQILASD
LSGLLLDLAHWGVADPSSLAFIDPPPETTLREARSLLVELGALDANGALTPRGRRIRDLA
LPVRLAAMAVSAAEEGEAQEACLLAVMLTEQGLGGSSLDLEERLRRFRADRGDRADAARG
LARRMAADLKAQMSNGQSALPGPLLMHAFPDRIALQRGGRGRFVMANGRGAEVPETERLA
AAGMLVIADLTGRAGAQRVLAAAEITRADVEAHMPEAIRREEQIFFDRASHQVRARRVTR
LGAIIFEETPLSRPSGEAAARALADGVRQLGLAVLPFSKETAQLRDRIGFLHRSIGEPWP
DVSDEALLSRLDDWFVPFQHDAGSIDGIRAHDLAEGLLSLVPYDLQRDLGKLAPTHFEAP
TGHRHSIHYDGDEPLLSIRVQELFGLKEHPTIGNGRLPLLLELISPGHRPIQTTRDLPGF
WAGSWRDVRADMRGRYPKHPWPEDPANAMPTTRAKPRGT
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatcttccgccactgccggttcgtgacattctgccccgtgtgggcgaggtgctc
aaagaggcgccgtccgtcgtgctctcggcgccgcccggcgccggcaagacgacgcttgtg
ccgctctttcttctggaccagccctggctcaacggcggcaaggtgatcctcctggagcca
cgcagactcgccgcccgtgccgccgccggacggatggccgagctgctcgaagaaaaggtc
ggtgagaccgtcggctaccgcatgcggctcgacaacagaatctcggcgcggacgcgaatc
gaggtggtgaccgagggcgtcttcagccggatgatcctcgacgaccccgaactttccggc
gtttcggccgtgctcttcgatgaattccacgagcgctcgctcgacgccgatttcggtctg
gcgctggcgctcgatgtgcagtcggctttgcgcgacgacctgaagatcgtcgtcatgtcg
gcaacgctcgacgtcgggcgggtcgccaggctgcttggcgatgctcccgtcatcgaaagc
cagggccgcagctttccgatcgatattcgctacgaggagaggaacgctggcgagagcgcc
gagaatgcggttgcgcgggcgatcgtggacgcccaccgatccgaagcgggttcgatcctc
gccttccttccaggccagggggagatcacccgcaccgccgagcgtctcgccgggcgtttt
gatgagaaaaccgcggtcgtgccgctctacggcaatctgagccagaaggagcaggatgcg
gccatccgcccggcacccgccggcacgcgcaagatcgtgctggcgacgtcgatcgccgag
acctcgatcaccatcgacggcgtcaggatcgtcgtcgacagcggtctgcagcgactgccg
gtgttcgaagcctcgacggggatcacccggttggagacggtgcgcgtatcgcgggcatcc
gccgatcagcgcgctgggcgcgccggacgaaccgagcccgggattgcaattcgcctgtgg
cacccgggccagaccgcagcgcttgtcgccttcacgccgccgcagatcctcgcgagcgat
ctttccggccttctgctcgacctcgcccactggggcgttgccgatccatcctcgctcgcc
ttcatcgatccgccgcccgagacgacgttgcgtgaggcgcgcagcctgctcgtcgagctt
ggagcgctcgatgccaacggtgcgctgacaccgcgcgggcgcaggatacgcgatctcgct
ttgccggtccggctggcggcaatggcggtctcggcggcggaagagggcgaggcgcaggaa
gcctgcctgctggcggtgatgctgaccgagcaaggcctcggcggcagcagcctcgatctc
gaggagcggctgcgccggttccgggcggaccgcggcgatcgcgccgatgccgctcggggg
ctggcaaggcgcatggcggccgacctcaaggcgcagatgagcaatggccaaagcgcgctg
cccggtccattgctgatgcacgcctttcctgaccggatcgcgctccagcgcggcggccgc
gggcgcttcgtcatggcgaacggacgcggcgccgaagtaccggaaaccgagcgacttgcc
gcagcgggaatgctggtcattgccgatctgaccggacgggctggcgcccagcgcgtgctc
gcggcagcagaaatcaccagggcggatgtcgaggcacatatgccggaggcaatccggcgg
gaggagcagatcttcttcgatcgtgcgagccaccaggtgcgcgcccgccgggtcacccgc
ctcggcgccatcatcttcgaggaaacgccgctttcacgcccgagcggcgaagcggcggcg
cgcgcgctcgccgacggcgttcgtcagttgggccttgccgtcctgcccttctcgaaggaa
acggcacaattgcgcgatcgcatcggctttctccataggtcgatcggcgaaccctggccg
gacgtctcggatgaagcgttgctgtcgcgcctcgacgactggttcgtgccgtttcagcat
gacgccggcagcatcgacgggatcagggcccatgatctcgccgaaggcctgctgtcgctc
gttccttacgatcttcagcgcgatctcggtaagctcgccccgacgcatttcgaagcgccg
accgggcaccgccattcgatccactatgatggcgacgagcccctgctttcgatccgcgta
caggagcttttcggtctgaaagagcatccaacgatcggcaatgggcggctgccgctgctc
ctggaactcatatcgcccggccaccgcccgatccagacgacccgcgatctgccgggcttc
tgggccggatcgtggcgggacgtgagagccgacatgcgcgggcgctatccgaagcatccc
tggccggaggacccggcgaacgcgatgccgacgacacgcgccaagccgcgtggtacatga
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