Sinorhizobium terangae: QA637_17110
Help
Entry
QA637_17110 CDS
T09097
Name
(GenBank) PAS domain S-box protein
Organism
steg
Sinorhizobium terangae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
PAS_9
PAS
PAS_3
PAS_4
Pkinase
HATPase_c
GAF
PK_Tyr_Ser-Thr
GAF_2
PAS_8
GAF_3
HisKA
nSTAND1
Kinase-like
HATPase_c_5
HATPase_c_2
AAA_22
AAA_29
DUF815
RsgA_GTPase
Rad17
Motif
Other DBs
NCBI-ProteinID:
WFU47556
LinkDB
All DBs
Position
3637646..3643897
Genome browser
AA seq
2083 aa
AA seq
DB search
MTELPTYVVETLWEDEEFVLSRRASVDDHFSLLVWAPASTQPTVETVARLDHAYALRDAL
DSAWAARPVALERRPGNTALLIEDTGGEVLARMVGKAWDLTPFLHVAIGLAVALGRLHSR
GLIHKDVKPSNILVDIDRREAWLSGFGIASRVPRERRAPEPPEIIAGTLAYMAPEQTGRM
NRSIDARSDLYSLGVTLYEMLTGTLPFTASDPMEWIHCHIARQPMPPDERAEGIPAPVGA
IVMKLLAKTAEDRYQTAAGVAYDLEHCLKAWEAHQRIDPFALGERDISDQLLISEKLYGR
EAEIDTLVAAFDRVVSQGRTELVLVSGYSGIGKSSVVNELHKVLVPPRGVFASGKFDQYK
RDIPYATLAQALQSLVRQLLSKNDAELARWRADIREALGANGSLMVDLIPELALIVGGQP
PAADLPPQEAQTRFQQVFRRFLGVFARAEHPLALFLDDLQWLDRATLDLIEHLSTHPEVR
HLLLVGAYRDNEVGPTHALVRTLGAIRNANGRVQEIVLEPLKPRDVGHLVVDALHCAPVI
AQPLVELVHEKTGGNPFFTIQFLMVLAEEALLAFDHDAGVWTWDMARIRAKGFTVNVVDF
MATKLSRLPGKTRDFLGKLACLGNRGRTAAMSMVFGVSEDEIHVALWEVVRAGLISRQEG
AYVFLHDRVHEAAYALISEDERVAVHLQIGRTLAARTTPAEIDTKIFEIVNQLDRGAALI
QSDEERERVAALNLRAGKRARTSTAYASALTYFAAGRALLEDGCWQRQYRLVFDLELHLA
ECEFLTGELASAEKRLSALVDRAATVVDRAAVTHLRQALYLTLNRPDRAIDVGLEYLRSV
GIDWSQQPSEEVVRQELERMWRLLDGRSIEQLIDLPLMSDPGWRATMDVLSGLFAPTLLT
NSNLYDLVVLRMATISLEHGNCDASCYAYSHINRVLGFRFGDYQTAFRFGQLACDLVQNR
GLDLFEARVYASFGAFTVPWMEDLFASRALIRRGFDMANANGDLTYAVFGFKNLITNLVV
SGEPLGDVEREAEEGLAYARKARFGFAVDWFTCQLMLIRALRGPSLDFNSADNAGYGDNA
YERHIKEDPPLALCTCTYWIHKLQACVLAQDHARAIEAMESATPLLWATRSFLEAADYHF
YGALTRAAACGPAGSEERAQHFDLLLDHQRQLTVWAENCPANFANRAALVGAEIARLEGR
NLDAMRLYEEAIRSAREHKFLQNEGIAHELAARFYAARDFETIANTYLRNARYCYLRWGA
DAKVRQLDQAHRHLRGEPVRPSATSTISTPVEQLDLATVVKVSQAVWGETVLEKLIDKLM
RTSVEHAGAERGLLILSRGDELRIAAEATTSGNTVIVGTREAGAAAAALPESILHYVVRT
RESVILDDASTENPFSADAYVLAHHARSILCVPLINRAKLVGVLYLENNLMSHVFTPTRI
AVLKLVALQAAISLENSRLYGDLQEREAKIRRLVDANIMGVCIWNLEGAITEANEEFLRM
VGCSREDVLSGRVRWKELTPSEWRDRNEGAVAELRAVGKFQPFEKEFFRRDGSRIPVLIG
GALFADGGNEGVAFVLDLTERKLAEDALRESQENLARTEQFSLVMATHTDLEGRWLKVPP
TLCELLDYTEEELLGRRFHEFTHPDDVEAEWKQCARLIRGEFKSFDLEKRYIRKDGSIVW
VYLNASVVLDVNAAPVHFRTYIRDITQRKRQEQALGQSEERYRTLAETATDVILAMDQKS
TILFANGAVEKAFGYTPTEIVGRKITMLMPERMRHRHEQAMSRYLESGEKRMSWNAVSLP
GLHKNGKEIDLDVSFAQVGTGDERFFSGILRDVTERKRTEEVLRQTRAELAHVARVATLG
EMSASIAHEVNQPLAAVVNSASACLHWLDAQKLQEARRSASRAIAEGRRASEIISRVRAL
ANKAPPQKDWLDVNETIHEVIALARGEMQQNGVALETQLSSDVPIILADRIQLQQVILNL
MMNAIEALNSVERDGRELLVRSATDKSEHVVISVQDSGPGFDPNRMDLLFDAFYTTKPQG
LGMGLAISRTLIEAHGGRLWATANAPRGAVFQFMLPVNSEKLA
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
gtgacagagctgccgacatacgtcgtcgagacgctttgggaggatgaggaatttgtcctg
tcccgacgtgcatcggtcgatgaccacttttcgcttttggtgtgggcgccagcgtcgaca
cagccgacggtggagaccgtcgcacgactcgatcacgcctacgcgcttcgggacgcgttg
gatagcgcgtgggcggcgcgacctgtggcgctggagcgccggcctgggaacactgcgctc
ctgatcgaggacacgggtggcgaagtccttgcgcgaatggttggaaaggcctgggatctg
acgccgttcctgcacgtcgcgatcggcctggctgtggcgctcggtcgcctccatagccgc
gggctgattcacaaggacgtcaagccatccaacatcctggtcgacatcgaccgccgtgaa
gcgtggctgtcaggcttcggcattgcttctcgcgtgccgcgtgaacggcgggcgccagaa
cccccggagatcatcgcggggacgcttgcctatatggcgcccgagcagactggtcgcatg
aaccgctccattgatgcgcgcagcgatctctactcgctcggtgtcacgctgtacgagatg
ctgaccgggacgcttccgttcacggcctcggatccgatggaatggatccattgccatatc
gcccgccagccgatgccgccggacgagcgagcggagggcattccggctccggttggagcg
atcgtgatgaagctcctcgccaagaccgccgaggaccgttaccagaccgccgccggcgtc
gcctacgatctcgaacattgcctgaaggcatgggaggcgcaccaacgcatcgacccgttt
gcgctgggcgagcgcgacatatcggaccaactgttgatctcggaaaagctgtatggacgg
gaggccgagatcgacactctcgttgctgcattcgatcgggtcgtgagccagggcagaacc
gaactcgtgctggtctccggctattccggtatcggcaagtcctccgttgtcaatgaactc
cacaaggtactggttccaccacgcggtgtcttcgcgtccggcaagttcgaccagtacaag
cgtgacatcccatacgccaccttggcgcaggcgctgcaaagtctcgtgcgtcagttgcta
agcaagaacgatgccgaactcgctcgctggcgcgccgacatacgcgaggcgctgggggcg
aacggctcgctgatggtcgacctcattccggaacttgctctcatcgtcggcgggcagccg
ccggcggccgacctgccgccgcaggaggcgcaaacgcgattccagcaggtcttccgtcga
ttcctcggcgtgttcgctcgggcggaacatccgctcgccctgttcctcgatgatctgcaa
tggctggacagggcgacgctcgacttgatcgaacatctcagcacccatccggaggtccgc
caccttctgttggtcggcgcatatagggacaacgaggtgggtccgacgcacgcgctggta
cggacacttggcgcgatccgcaatgccaacggaagggtgcaggagatcgtgctcgagcct
ctcaagccccgcgatgtggggcatctggtcgtcgacgcattgcactgcgccccggttatc
gcccagccgctggtagagctggtgcacgaaaagaccgggggaaatccgttcttcacgatc
cagttcttgatggtccttgccgaggaggcgctgctcgcgtttgaccatgacgcgggggtc
tggacctgggacatggcccgcatcagggccaagggcttcaccgttaacgttgtcgatttc
atggccacgaagctcagccgtctgccgggcaaaacgcgggacttcttgggaaaactcgcg
tgcctcggaaatcggggacggaccgccgcaatgagtatggttttcggcgtgtctgaagac
gagatccatgtggctctctgggaggtcgtgcgcgcaggactcatctcccgtcaggagggc
gcatatgtcttcctccatgaccgtgtccacgaagcggcctatgccttgatctccgaagat
gagcgggtggcagtgcacctgcagattggcaggacactggccgcacggacgacgcccgcc
gaaatcgacacgaagatcttcgagatcgtcaatcagctcgatcgcggcgcggccttgatt
caatcggatgaagagcgggagcgggtcgcagctctcaacctgcgtgcaggcaagcgcgcg
aggacttcaacggcttatgcctcggcattgacctatttcgccgccggtcgcgccttgttg
gaggatggctgctggcagcgacagtatcgcctagtgttcgatctggaactccatctggcc
gaatgtgaattcctgaccggcgaactcgcctcagcagagaaacgcctctcagccctggtg
gaccgtgcggcaaccgttgtcgacagagccgcggtcacgcacttgcgccaggcgctttac
ctcactcttaaccggcccgatcgcgccatcgacgtcggcttggaatatctccgcagtgtc
ggcatcgactggtcgcagcaaccgtcggaagaggtcgtacgtcaggaactcgagcgcatg
tggcggctgctcgacggccgatcgattgagcagctcattgatcttccgttgatgagcgac
cccggttggcgcgcgacaatggacgttctctcgggcctgttcgcgccgacgctgctcacc
aacagcaacctctacgacctcgtcgtccttcgtatggcaacgatcagtctggagcacggc
aactgcgatgcctcgtgctacgcgtattcccacatcaaccgggtcttgggctttcgtttc
ggtgactaccagaccgcttttcgcttcggacagcttgcatgcgacctcgtgcagaaccgt
ggcttggatctcttcgaggcgcgcgtctacgcctctttcggagcattcaccgtcccgtgg
atggaagacctttttgctagccgcgcactgataaggcgcggcttcgatatggcgaacgcc
aacggcgatctgacctatgcggtttttggcttcaagaacctgatcacgaatcttgtggtc
tcgggagagccacttggcgacgtggaacgcgaggcggaggaggggcttgcctatgcccgc
aaggcgcgatttggtttcgccgtcgattggttcacctgccagctcatgctgatccgagcc
cttcgcggaccctcgctggacttcaattctgccgacaatgcgggatacggtgacaacgct
tacgagcggcacatcaaggaagacccgcctctggcgctctgcacctgcacctactggatt
cacaagctgcaagcgtgtgtgctggcacaggatcatgcaagggccatcgaggcgatggag
agcgctacccccttgctttgggcgacacggtcattcctggaggccgcggattatcatttc
tacggcgcgctcacacgggcggctgcctgcggccctgcgggaagcgaagagcgggcacag
cattttgacctgctccttgaccaccaacgccaactcacggtgtgggcggaaaactgcccc
gcaaattttgcaaatcgcgcagcattggtcggcgccgaaattgcgcggctggaagggcgg
aatctggacgcgatgcgcctgtacgaagaagcgattcgctcggcgcgcgaacacaagttt
ctacagaacgagggcattgcccacgaactcgctgcgcggttttacgcggcacgcgacttc
gagacgatcgccaatacctatttgcgcaacgcgcgctattgctatctccgttggggtgcc
gacgccaaggtgcgccagctcgatcaggcccatcggcatctgcgcggggagccggtgcgc
ccgagtgcgacatcgacgatcagcacgcccgtcgagcaactggatctcgccaccgttgtc
aaagtctcgcaagccgtgtggggcgagactgtcctggagaagctgatcgacaagctcatg
cgaacttcggttgagcatgcgggtgccgagcgaggtctgttgattctctctcggggtgat
gagctgcgcattgcggcagaggccaccaccagcggcaacactgtcatcgtggggacgcgg
gaagcgggcgcggccgcggccgccctgccggaatcgatcctccattatgtcgtgcgcacc
cgggagagcgtaatcttggacgatgcctcaaccgagaacccgttttcggccgatgcgtac
gtcctcgcgcatcacgctcgttccattctctgcgtgccgctgatcaaccgggccaaactc
gtcggcgtgctttatctcgaaaacaacctgatgtcccatgtgttcactccgacccggatc
gccgtgctgaaactggtggccctgcaggcggcgatctcactggagaacagccgtctttac
ggcgacctccaggaacgggaagcgaagatccggcgcctggtcgacgccaacatcatggga
gtctgcatctggaatctcgagggcgcgattaccgaggccaatgaagaatttctgcgcatg
gtgggctgcagccgtgaagatgttctgtcgggccgtgtacgctggaaggagctcacgccg
tcggagtggcgcgatcgcaacgagggagcggtggcggagctacgggcggtcgggaagttc
cagccattcgagaaggagtttttccgcagagacggcagccgcataccggtgctgatcggt
ggcgcactgtttgctgacggtggaaatgagggcgtcgcgttcgtgctcgacttgaccgaa
cgcaagctcgccgaagatgcattgcgcgagagccaggagaatttggcgcgcacggagcaa
ttctccctggtgatggcgactcacacggatctggagggtcgttggcttaaagtgccacca
actctctgcgagctgctggattacacagaggaagaactgctgggacgccggtttcacgag
ttcacccacccggacgacgtggaggcagagtggaagcaatgcgcgcggctcatccgcggc
gagttcaaatcgtttgatctggagaagcgctatatccggaaggatggctccatcgtatgg
gtttatctgaacgcctcggttgtattggacgtcaacgccgcgccggttcactttcggacc
tacatccgagacatcacccagcgcaaacggcaggagcaagcgttgggccagagcgaggag
cgttatcgtacgctcgccgagaccgccacggacgtcattctggcgatggaccagaagagc
acaattctgttcgccaacggggcggtggagaaggccttcggttataccccaacggaaata
gtcggtcggaagatcaccatgctcatgcccgagcgcatgcggcaccgccacgaacaggcg
atgagtcgttatctggaatccggggagaaacggatgtcgtggaacgccgtgtctttgccc
ggattgcacaagaacggaaaagagattgacctggacgtgtcgtttgcccaggtggggacg
ggagatgagcggttcttcagcgggatcctgcgcgacgtgaccgagcgcaagcgaacggaa
gaagtgctccgccagacgcgggcggaattggcccatgttgcgcgcgtggcaacgctcgga
gagatgagcgcttcgattgcccacgaagtcaatcagccgcttgccgcggtcgtcaacagc
gccagcgcgtgtttgcactggctcgatgcgcagaagctgcaggaagctcggcgctcggcc
tcgcgggcgatcgcggaaggccgccgggcgagcgaaatcatctctcgcgtacgcgcgctc
gccaacaaggcgccgccccaaaaggactggctcgacgtcaatgagacgatacacgaagtc
attgcactggcacgcggcgagatgcagcagaacggtgtggccctggagacccagctatcg
agcgatgtgccgatcatcctggcagaccgcattcaactgcagcaggtgattctgaacctg
atgatgaacgccatcgaggccttgaacagcgttgaaagggatgggcgcgagttgctggtt
cgctccgccacggacaaatcggagcacgtcgtgatctcggtccaggattcgggcccgggg
ttcgatccgaaccgcatggacctgctcttcgatgccttctatacgaccaagccgcaaggg
ttgggcatggggctggcgatcagccggactcttatcgaggcccacggcgggcgcctatgg
gcgacggcaaatgcgccacggggcgctgtttttcagttcatgctaccggttaatagcgag
aagctagcctga
DBGET
integrated database retrieval system
