Stenotrophomonas sp. SBJS02: FQS62_000525
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Entry
FQS62_000525 CDS
T10678
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
stej Stenotrophomonas sp. SBJS02
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stej03032
]
FQS62_000525
03400 DNA repair and recombination proteins [BR:
stej03400
]
FQS62_000525
Enzymes [BR:
stej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FQS62_000525
DNA replication proteins [BR:
stej03032
]
Prokaryotic type
DNA Topoisomerases
FQS62_000525
DNA repair and recombination proteins [BR:
stej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FQS62_000525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
GHL6
Motif
Other DBs
NCBI-ProteinID:
WAP02050
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All DBs
Position
119128..120180
Genome browser
AA seq
350 aa
AA seq
DB search
MPTPSTPEQQAARAAGLRYVDDTQPGFSRRRAGKGFAYRDAEGHAVREAATLQRIRALAI
PPAYTAVWICAHANGHLQATGRDARGRKQYRYHPDWAAVRDAGKFDRVIAFGEALPALRR
RLSRDLKRSGFPREKVLAVVVALLADTLVRVGNETYAKENKSFGLTTLRNRHLDLLRGGR
VRMRFRGKSGQLHEVTVGDRRLGTLVRGVQQLPGQALFQYRDDDGVVQPVDSGAVNDYLR
EVMGEDFTAKDFRTWGGTLAAVQAFAATELPEPASQRAMAKVQREVVCKVATQLGNTPAV
CRKAYIDPCVFAGWERGELAKLAGLRGPRQWEQATLKVLRRARRLAKRSA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgccctccaccccggaacaacaggccgcgcgcgccgccggcctgcgctatgtc
gatgacactcaacccggcttcagccgtcgccgcgcgggcaaggggtttgcctaccgcgat
gccgaggggcatgccgtgcgcgaggcggcaacgctgcagcgcatccgcgccctggcgatt
ccgccggcgtataccgcggtgtggatctgcgcccacgccaacggccatttgcaggccacc
ggccgcgatgcacgcgggcgcaagcagtaccgctaccaccccgactgggccgcagtgcgc
gacgccggcaagttcgaccgggtgatcgccttcggcgaagcactgcctgcgctgcggcgc
cggctcagccgcgatctcaagcgcagtggcttcccccgtgagaaggtgctggcggtcgtg
gtcgcgctgctggccgacaccctggtgcgggtaggcaacgaaacctatgccaaggaaaac
aaatcctttggcctgaccacgctgcgcaaccggcatctggatctgctgcgcggcgggcgc
gtacggatgcgcttccgcggcaaatccgggcagctgcatgaagtgacggtaggtgaccgc
cggctgggcacgctggtgcgcggtgtgcagcagttgccgggccaggcgttgttccagtac
cgcgacgacgacggtgtcgtccagccggtcgactccggtgcagtcaacgattacctgcgc
gaggtgatgggcgaggatttcaccgccaaggatttccgcacctggggcggcaccctggcc
gcagtgcaggcgttcgccgccactgaactgcccgaaccggccagccagcgcgcgatggcc
aaggtacagcgcgaggtggtgtgcaaggtggcgacccagttgggcaatacgcctgcggta
tgccgcaaggcctatatcgacccctgcgtgttcgccggctgggagcgcggcgaactggcg
aaactggccggcctgcgtgggccgcgccagtgggaacaggccacgctgaaggtactgcgc
cgggcgcggcggctggccaagcgcagcgcctga
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