Stenotrophomonas sp. SBJS02: FQS62_004615
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Entry
FQS62_004615 CDS
T10678
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
stej Stenotrophomonas sp. SBJS02
Pathway
stej03030
DNA replication
stej03430
Mismatch repair
stej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FQS62_004615 (dnaX)
03430 Mismatch repair
FQS62_004615 (dnaX)
03440 Homologous recombination
FQS62_004615 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stej03032
]
FQS62_004615 (dnaX)
03400 DNA repair and recombination proteins [BR:
stej03400
]
FQS62_004615 (dnaX)
Enzymes [BR:
stej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FQS62_004615 (dnaX)
DNA replication proteins [BR:
stej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FQS62_004615 (dnaX)
DNA repair and recombination proteins [BR:
stej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FQS62_004615 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
AAA_18
AAA_30
PIF1
AAA_7
AAA_19
AAA_2
Mg_chelatase
nSTAND3
TsaE
AAA_assoc_2
AAA_24
Se-cys_synth_N
Glyco_tranf_2_5
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WAP02784
LinkDB
All DBs
Position
1002900..1004954
Genome browser
AA seq
684 aa
AA seq
DB search
MENGGLMSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTI
ARIFAKSLNCEQGTSADPCGQCAACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYM
PSRGKYKVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFN
LKRLDEDQIQGQMTRILAAEEIEADGSAIVQLAKAADGSLRDGLSLLDQAIAYAGGALRE
DVVRTMLGTVDRTQVAAMLDALADGDGPRLLQVVAALAEFSPDWSGVLEALAEGLHRIQV
QQLVPGAAAAAEGLDAAAFAERLRPEVVQLWYQMALNGRRDLPLAPSPRAGFEMAVLRML
AFRPATAVPPVPKSVEGAGNVPGGHVAGDGSGAGTHEATPATAAASASPTVAAQVAAPVQ
AAPREPEPEPEPVPQPDPEPTPEPEPVPVEEPVSPPPVKVEAAAPPSVEAEAGDDLPPWA
TDEAEARDEALAAEMAGPDAAMVAPWHEPPAPVAAPSEPAPSERPFRTEGIAIAPAEPAP
VQETAPLEGVSDLASAEDWLDLVANSGLSGPSRQLAANAAFISCQHGTLKLGLSPGFEYL
RSERALAALGEMLEKALGQAPKIVVETVETEHVPAETLHQRADRQRGERQQVAETVFMDD
PEVQVLIQQHGARVVSDSIRSFDE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacggtggcctgatgtcctatctcgtccttgcccgcaagtggcgtccgaagcgt
tttgccgagctggtgggccaggaacacgtggtccgtgcgctcagcaatgcgctggacagc
ggccgggtccaccacgcgttcctgttcaccggcacccgcggcgtgggcaagaccaccatc
gcgcgcatcttcgccaagtcgctcaactgcgagcagggcaccagcgccgacccgtgcggc
cagtgcgcggcctgcctggacatcgacgccggccgctacatcgacctgctggaaatcgac
gccgcgtccaacaccggtgtggatgacgtgcgcgaggtgatcgagaacgcgcagtacatg
ccctcacgtggcaagtacaaggtctacctgatcgacgaagtgcacatgctgtccaaggcg
gcgttcaacgcgctgctgaagacgctggaagaaccgccggagcacgtgaagttcctgctg
gccaccaccgatccgcagaagctgccggttaccgtgctcagccgctgcctgcagttcaac
ctcaagcgcctggacgaagaccagatccagggccagatgacccgcatcctggcggccgag
gagatcgaagccgacggcagtgccatcgtgcagctggccaaggccgctgacggtagcctg
cgcgacggcctgtcgctgctggaccaggcgattgcctatgccggcggcgcgctgcgcgag
gacgtggtgcgcaccatgctgggcacggtcgatcgcacccaggtggcggcgatgctcgat
gcgctggctgacggcgatggcccgcgcctgctgcaggtggtggccgcgctggccgaattc
tcgccggactggagtggcgtactggaagcgctggccgaaggcctgcaccgcatccaggtg
cagcagctggtaccgggtgccgcagcggctgccgaaggcctggatgccgcagcattcgcc
gaacgcctgcgcccggaagtggtgcagctctggtaccagatggccttgaacggccgccgt
gacctgccgttggcgccgagcccgcgcgcgggctttgaaatggccgtgctgcgcatgctg
gctttccgtccggccacggcggtcccgccggtgccaaaatcggtggagggtgcaggcaat
gtgccgggcggccatgttgccggtgatggcagcggtgcgggtacccacgaagcgacgccg
gcgactgccgccgcttcggcaagcccgactgtggcggcgcaggtggccgctccggtgcag
gccgcgccgcgcgaacctgaacccgaacctgagccggtcccgcaacccgatcctgagccg
acgccggagcccgagccggtcccggtggaagagccggtgtcaccgccgccggtgaaggtc
gaagccgcagcgccgccgtccgttgaagcagaagcgggcgacgacctgccgccgtgggcc
accgacgaagcagaggcgcgtgacgaggcgctggcagccgagatggctgggccggacgcc
gccatggtggcgccctggcatgaaccgccagctcccgtcgcggctcccagcgagcctgca
ccgtccgagcgcccgttccgcaccgaaggcattgccatcgcgccggccgagcccgcgcca
gtgcaggagactgcgccgctggaaggtgtcagcgatctggccagtgccgaggactggctg
gatctggtcgccaacagtggcctgagcggcccgtcgcggcagctggcggccaacgctgcc
ttcatcagttgccagcacgggaccttgaaactgggcctttcgcccggatttgaatacctg
cgctcggagcgcgcgctggccgccctgggggagatgctggagaaggccctcggccaggcg
ccgaagatcgtggtcgagaccgtggaaaccgagcacgttccggccgagaccctgcaccag
cgtgccgatcgccagcgtggcgagcggcagcaggtggcagagactgttttcatggacgat
ccggaagtgcaggtgctgatccaacagcacggtgcccgggttgtttccgattccatccgt
tcttttgacgagtaa
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