Stenotrophomonas sp. SBJS02: FQS62_008255
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Entry
FQS62_008255 CDS
T10678
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
stej Stenotrophomonas sp. SBJS02
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stej03016
]
FQS62_008255 (truD)
Enzymes [BR:
stej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FQS62_008255 (truD)
Transfer RNA biogenesis [BR:
stej03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FQS62_008255 (truD)
Prokaryotic type
FQS62_008255 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WAP03462
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All DBs
Position
1725715..1726746
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AA seq
343 aa
AA seq
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MIPLPLAFGAPLLTARIRTTPDDFQVDELPAFEATGEGEHLLLHIRKRGANTVHVAKVLA
KWADLPEMAVSYAGMKDRHAVTTQRFSVHLPKRVAPDLAELAGDEIEVLEATWHNRKLQR
GALAGNRFKLVLREVQGDAAAISERLQQIAERGLPNWFGEQRFGRDGGNVPAALAMFGGR
RMRKDQRSLLLSAARSALFNRVLAARVEQGNWDQPLEGEVWMLDGSRSVFGPEPYTDVLA
ERLARFDIHPSAPLWGEGELRSTDAARELELAALDDEESKALRAGLEDARLKQERRALRL
RPALLQHQWLADDVLELSFALPPGCYATAVLHELGPVEDASQA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattccgctgccgttggcgtttggtgcgccgttgttgacggcgcgcatccgcaccacg
ccggacgatttccaggttgacgagctgccggccttcgaggccaccggtgaaggcgagcac
ctgctgctgcacatccgcaagcgcggcgccaacaccgtgcatgtggccaaggtgctggcc
aagtgggcggacctgccggaaatggcagtgagctacgccggcatgaaagaccgccacgcg
gtcactacccagcgtttcagcgtgcacctgcccaagcgcgtcgcgccggacctggccgag
ctggccggtgacgagatcgaagtgctcgaagccacctggcacaaccgcaagctgcagcgt
ggcgcactggccggcaaccgcttcaagctggtgctgcgcgaagtgcagggcgatgccgca
gcaatcagcgaacgcctgcagcagattgccgagcgcggcttgccgaactggttcggcgag
cagcgctttggccgcgacggcggcaatgtgccggcggcactggcgatgttcggtggccgc
cgcatgcgcaaggaccagcgttcgctgctgctgtcagctgctcgttcggcgctgttcaat
cgggtgctggccgcgcgtgtggagcagggcaactgggaccagccgcttgaaggtgaagtg
tggatgctcgatggcagccgcagcgtgttcggacccgagccgtacaccgatgtcctggcc
gagcgcctggcgcgtttcgacatccatcccagcgcgccgctgtggggcgaaggcgagctg
cgcagcaccgatgcggcacgcgagctggagctggccgcgctggacgacgaagagtcgaag
gcactgcgggccggcctggaagacgcgcggctgaagcaggagcgccgcgcgctgcgcctg
cgcccggcgctgctgcagcaccaatggttggccgatgacgtgctggagctgtcgttcgcg
ctgccaccgggttgctacgccaccgccgtgctgcacgagctcggcccggtcgaagacgcc
tcgcaggcctga
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