Stenotrophomonas sp. SBJS02: FQS62_010250
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Entry
FQS62_010250 CDS
T10678
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
stej Stenotrophomonas sp. SBJS02
Pathway
stej03410
Base excision repair
stej03430
Mismatch repair
stej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FQS62_010250 (recJ)
03430 Mismatch repair
FQS62_010250 (recJ)
03440 Homologous recombination
FQS62_010250 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stej03400
]
FQS62_010250 (recJ)
DNA repair and recombination proteins [BR:
stej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FQS62_010250 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FQS62_010250 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FQS62_010250 (recJ)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WAP03834
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Position
2173542..2175299
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AA seq
585 aa
AA seq
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MSLAADAVQPASDTPTIRRRDAVAPGSWPEGTLPLLARLYASRGAGTPELAQPKLGNLHA
PELLTGIDDAVGLLVEAIVNDKRILVVGDFDCDGATACAVGVRGLRMLGARHVFHAVPNR
MVHGYGLSPSLVDELAALKPDLLVTVDHGIACHAGVIAAKARGWQVLVTDHHLPGPQLPP
ADVIVDPNLDGDAFPSKSLAGVGVIFYVLMALRRQMREAGVFADGKGPDLTTLLDLVAVG
TVADLVALDPNNRALVSAGLRRLRAGQGCVGLRALIEASGRDAARLTATDIGFALGPRLN
AAGRLEDMALGIALLLTEDPRQAREIAQTLEQINSERRAVQQSMTDDAEQALTRVVLDMA
GQRPVAACLFDADWHPGVVGLVASKMKDRLHRPVIAFAPAEPGADTLRGSARSIPGLHIR
DALALVDARHPGLIERFGGHAMAAGLSLRLDHVDDFKAAFVAVVLEMLDPAALQQQVLSD
GELAADELDHRHADALRLAGPWGQGFPEPLFDGHFEVANWRVLKERHLKLELRLPGVPGT
INAIHFGGWHGNAPGRHVHLAYRLACDDYRGGSAIQLIVEHCLPA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttgccgccgatgctgtgcagcccgcctctgatacgccgacgatccgccgccgc
gatgcggtcgcgcccggcagctggccggagggcacgctgccgttgctggcgcgtctctat
gccagccgtggcgcaggtacaccggagttggcgcagccgaagctgggcaatctgcatgcc
cctgagctgctgaccggcatcgacgatgcggtgggcctgttggttgaggccatcgtcaac
gacaagcgcatcctggtggttggcgatttcgactgcgatggcgccaccgcctgtgcggtc
ggcgtgcgcggcctgcgcatgctcggcgcacggcatgtcttccacgcggtgcccaaccgc
atggtgcacggctacggcctgtcgccgtcactcgtggacgagctggccgcgctgaagccg
gacctgctggtcacggttgaccacggcattgcctgccacgccggtgtcatcgcggccaag
gcgcgtggctggcaggtgctggtcaccgatcaccatcttcccggtccgcagttgccgccg
gccgatgtcatcgtcgatcccaatctggacggcgatgccttccccagcaagtcgctggca
ggcgtcggtgtgatcttctacgtgttgatggcgctgcgccggcagatgcgcgaggccggc
gtttttgccgatggcaaggggccggacctgaccacgctgctggacctggtggcggttggc
accgtcgccgacctggtagcgctggacccgaacaatcgggcgctggtcagcgcgggcctg
cgccggctgcgtgcagggcagggctgcgtcggcctgcgtgcactgatcgaagccagcggc
cgtgatgccgcgcggctgacggccaccgatatcggcttcgcactcggcccacgcctgaac
gcggcgggccggctggaagacatggcgctgggcattgcgctgctgctgaccgaagacccg
cgccaggcgcgcgagatcgcgcagacgctggagcagatcaattcggaacggcgcgccgtg
cagcagtcgatgaccgacgacgccgagcaggcattgacccgcgtggtgctggacatggcc
ggccagcgcccggtggcggcctgcctgttcgatgcggactggcatccgggcgtggtcggc
ctggtcgcgtcgaagatgaaggatcgcctgcatcgcccggtgatcgccttcgccccggcc
gaacccggcgccgacaccctgcgtggctcagcccgctcgattcccggcctgcacatccgt
gacgcactggcgctggtcgacgcgcgtcatccgggcttgatcgaacgtttcggtggccat
gccatggcggctggactgagcctgcggctggatcacgtcgatgacttcaaggccgccttc
gtcgccgtggtactggaaatgctcgacccggcggcactgcagcagcaggtcctcagcgac
ggcgaactggccgcggacgaactcgaccatcgccacgctgatgcgctgcgtctggcaggc
ccatggggccagggcttccccgagccgctgttcgacggccacttcgaagtggccaactgg
cgcgtgctgaaggagcgccacctcaagctggaactgcgcctgccgggcgtgcccggcacc
atcaacgcgatccacttcggcggctggcatggcaacgcgccgggtcgccacgtgcatctc
gcctatcgtctcgcctgcgacgactatcgtggtggcagcgccatccagctgatagtcgag
cactgcctgcccgcctag
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