Stenotrophomonas sp. SBJS02: FQS62_010460
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Entry
FQS62_010460 CDS
T10678
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
stej Stenotrophomonas sp. SBJS02
Pathway
stej02020
Two-component system
stej02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FQS62_010460
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FQS62_010460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stej03021
]
FQS62_010460
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
stej02035
]
FQS62_010460
Transcription machinery [BR:
stej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FQS62_010460
Bacterial motility proteins [BR:
stej02035
]
Flagellar system
Flagellar assembly proteins
Stator
FQS62_010460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
UPF0147
Motif
Other DBs
NCBI-ProteinID:
WAP03873
LinkDB
All DBs
Position
complement(2230886..2231629)
Genome browser
AA seq
247 aa
AA seq
DB search
MKGAAQYREVQRSAANEVIAQHSDLVRRIAHHLAARLPASVEVDDLIQAGMMGLIEASRS
YDADQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDAAATIRRLEQSSGRAASAT
EVAAAMEMPLPEYLRLMEDAARGQVLSLESRIEDQGELDTVAQGGPTPQQVLERGEFGRE
LGKAIGHLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQAVLRLRGRLKLFEA
ADAGLEE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgcagcccagtacagggaagtccagcgctcggcagccaacgaggtcatcgcc
cagcactcggatctggtgcggcgcatcgcccaccacctggccgcacgcctgccggcgagc
gtcgaggtcgacgacctgatccaggccggcatgatgggattgatcgaggcctcgcgcagc
tatgacgccgaccagggtgcctccttcgagacctatgcctcgatccgcatccgcggttcg
atgatcgatgagatccgccgcggcgactgggtgccgcgctcggtgcaccgccgcgcacgt
gatgccgccgccacaatccgccgcctggaacagagcagtggccgtgccgccagcgccacc
gaagtggccgccgcgatggagatgccgctgcccgagtacctgcggctgatggaagacgcc
gcccgtggtcaggtactgagccttgaatcgcgcatcgaagaccagggcgagctggacacc
gtcgcccagggtggcccgaccccgcagcaggtgctggagcgcggcgagttcggccgcgaa
ctgggcaaggccatcggccacctgcctgagcgcgaacagctggtgctctcgctgtactac
gagcaggaactgaacctgaaggagatcggcgcggtgctcggcgtgagcgagtcgcgggtc
tgccagatccacggccaggcggtactgcgcctgcgtggccggctgaagctgttcgaggct
gccgacgccggcctcgaagaatga
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