Stenotrophomonas sp. SBJS02: FQS62_010570
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Entry
FQS62_010570 CDS
T10678
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
stej Stenotrophomonas sp. SBJS02
Pathway
stej02020
Two-component system
stej02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FQS62_010570
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FQS62_010570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stej03000
]
FQS62_010570
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
stej02035
]
FQS62_010570
Transcription factors [BR:
stej03000
]
Prokaryotic type
Helix-turn-helix
Other families
FQS62_010570
Bacterial motility proteins [BR:
stej02035
]
Flagellar system
Flagellar assembly proteins
Others
FQS62_010570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
HTH_50
AAA_19
AAA_30
bpMoxR
AAA
MCM
Motif
Other DBs
NCBI-ProteinID:
WAP03891
LinkDB
All DBs
Position
complement(2254433..2255935)
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AA seq
500 aa
AA seq
DB search
MSESRILVLDNDAVRAERTVALLEFMDFNPRWVADAADFDLGRQRQNDWMAVIVGSLDDT
AASTALYHWLGGSSLPPPVLLADGDAAAFAQQHGLHEANIWPLETPLRHAQMEALLRRAS
LKRLDAEHQAGAAQDQGPTGNGPAVTALRTMIEQVAAFDTTVLVLGESGTGKEVVSRAIH
QRSPRRDGPFVAINCGAIPADLLESELFGHEKGAFTGALTARKGRFEMAEGGTLLLDEIG
DMSLPMQVKLLRVLQERSFERVGGNQTIRCNVRVVAATHRDLETRIAEGKFREDLFYRLN
VFPIDVPALRERREDLPALVETIAAQLARTGRGEVRFTPEALQALAGYDWPGNVRELTNL
VERLAVLHPGGSVRVQDLPARYRGDAALAVPAPAPEVPVASEERLDLRSFSFHTPGSGNQ
PALEHGIAVNRAAAPAALPDDGLDLRNHMANIELGLINEALERTQGVVAHAAQLLGLRRT
TLVEKLRKYGIEREQAELAG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaatcgcgcatcctggtgctggacaacgacgccgtgcgcgcagagcgcaccgtt
gccctgctggagttcatggatttcaacccgcgctgggttgccgacgcggccgacttcgac
ctgggccgccagcgccagaacgactggatggccgtcatcgtcggcagcctggacgacacc
gctgccagcaccgcgctgtaccactggctgggcggcagcagcctgccgccgccggtgctg
ctggccgatggtgatgctgcagcgtttgcccagcagcacggtctgcacgaagccaacatc
tggccgctggaaacgccgctgcgccatgcgcagatggaagccctgctgcgccgcgccagc
ctcaagcgcctggacgccgagcaccaggccggcgccgcgcaggatcaaggcccgaccggc
aacggcccggcggtgactgcactgcgtaccatgatcgagcaggttgccgcattcgatacc
accgtactggtgctgggcgaatccggtactggcaaggaagtcgtgtcgcgtgcgatccac
cagcgctcgccgcgccgtgatggtccgttcgtggcgatcaactgcggcgccattccggcc
gacctgctggaaagcgaactgttcggccacgaaaagggtgcctttactggcgcactgacc
gcgcgcaagggccgtttcgaaatggccgagggcggcactctgctgctcgacgaaatcggc
gacatgagcctgcccatgcaggtgaagctgctgcgcgtgctgcaggaacgcagctttgag
cgcgtcggtggcaaccagaccatccgctgcaacgtgcgcgtcgtggccgcgacccaccgc
gatctggaaacgcgcatcgccgaaggcaagttccgcgaggatctgttctatcgcctcaac
gtgttcccgatcgacgtgcccgccctgcgcgagcgtcgcgaagacctgccggcgctggtg
gaaaccatcgccgcacagctggcgcgcaccggccgtggcgaagtgcgcttcaccccggaa
gccctgcaggccctggccggctatgactggccgggcaacgtgcgcgagctgaccaacctg
gtcgaacgcctggcggtgctgcatccgggcggttcggtgcgcgtgcaggacctgccggca
cgctatcgtggcgatgccgcgctggccgtccccgcgccggcacctgaggttccggttgcc
agcgaagaacgcctggacctgcgcagcttctcgttccacaccccaggcagcggcaaccag
ccggcgctggaacacggtatcgccgtcaatcgcgcagccgccccggcggcactgcccgac
gacggtctggacctgcgcaaccacatggccaacatcgaactgggcctgatcaacgaagca
ctggaacgcacccagggcgtggtcgcccacgccgcccagctgctcggcctgcgccgcacc
accctggtggaaaagctgcgcaagtacggcatcgagcgcgagcaggccgaactggccggc
tga
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