Stenotrophomonas sp. SBJS02: FQS62_011610
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Entry
FQS62_011610 CDS
T10678
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stej Stenotrophomonas sp. SBJS02
Pathway
stej03420
Nucleotide excision repair
stej03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FQS62_011610
03430 Mismatch repair
FQS62_011610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stej03400
]
FQS62_011610
Enzymes [BR:
stej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FQS62_011610
DNA repair and recombination proteins [BR:
stej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FQS62_011610
MMR (mismatch excision repair)
Other MMR factors
FQS62_011610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
cobW
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WAP00013
LinkDB
All DBs
Position
2486508..2487605
Genome browser
AA seq
365 aa
AA seq
DB search
MSSVPSPNRVLLSAAGSGKTTLLVRQALERPERRIAIVTYTLENLEEIRRSFEAHAGAVP
AHVTLHSWYGFLLRQCIRPYQAALCPEPRIETILFVEGVTNNRAPRTQVARHYLAGNRMY
SDRAADFAVRCDELTQGQVVARLAAMYDELYIDEVQDLAGFDLDLVERLLKSEIAITLVG
DTRQATYATNYAQRYSQYRGPNLAALFQIWEADGLCRLDHRLTSLRCVQALCDMADTLYP
QMPRTQSGNGEVTGHDGIYLVAPGDVAAYMQEFAPTVLRHDRRQACDGLPAVNFGQCKGR
TYSRVLIFPNGPLTQYLRTADAARITAPPKYYVAFTRARQSVAFVYAGACALPGHQLYAP
ASADA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgtgccatcacctaaccgggtcctgctctcggcagccggctcgggcaagacc
acgttgctggtccggcaggccttggagcgacctgagcgccgcatcgcgattgtcacctac
acgctggaaaacctggaagagatccggcgctcgtttgaggcccacgcaggcgcggtcccc
gcgcatgtcaccttgcacagctggtatggctttctgctgcgccagtgcattcgcccgtac
caggctgcgctttgccctgagcctcgcatcgagaccatcctgttcgtagaaggtgtcacc
aacaaccgcgccccacgcacccaggtggcgcgccactacctggcgggcaaccggatgtat
tcggaccgagcggccgatttcgctgtgcgctgcgatgagctgacccaaggccaggtcgtg
gcgcgattggcggcgatgtacgacgagctctacatcgacgaagtccaggatctggccggc
tttgatctggatctggtcgaacggctgttgaagagcgagattgccatcacgttggtaggc
gatacgcgccaagccacgtatgcgaccaactatgcgcaaaggtacagccaataccgtggt
ccgaatctggcagcgctgtttcagatttgggaggccgacggcttatgccggctggatcac
cgcctcaccagtctgcgctgcgtccaggccctgtgcgatatggctgacacgctctatccg
cagatgccgcggacccaatcaggcaatggcgaggtcaccggacacgatggcatctacctc
gtcgctccaggggatgtggccgcgtacatgcaggagttcgcccccaccgtgctccggcat
gaccggcggcaggcgtgcgacggactgccggcggtgaactttgggcagtgcaagggccgc
acctacagtcgggtcctcatctttccgaacgggccgttgacgcagtacctgcgcacggcc
gatgcagcgcgtatcaccgcgccgccgaaatactacgtggccttcacccgggcgcggcaa
agcgtggcctttgtgtatgccggcgcgtgcgcgttgccgggtcatcagctctatgcgcct
gccagcgcagacgcatag
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