Stenotrophomonas sp. SBJS02: FQS62_013385
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Entry
FQS62_013385 CDS
T10678
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
stej Stenotrophomonas sp. SBJS02
Pathway
stej02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FQS62_013385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stej03021
]
FQS62_013385
Transcription machinery [BR:
stej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FQS62_013385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_23
GerE
CDT1_C
Motif
Other DBs
NCBI-ProteinID:
WAP00349
LinkDB
All DBs
Position
2882137..2882655
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AA seq
172 aa
AA seq
DB search
MAVPATSSTALAGFYREHHGWLLGWLRRRTHDADCAADLTQDTFLRLLSRRVDPTGLRLP
RAYLSTIAHALLVNHWQRADLERAYLAALAAQPEPVHPSAEERTQALQLLHAIADMLSGL
AERPRRAFLLARLSGLGYAEIGVQLGVSERMVKKYMAQAMLHCLRLSGDAAA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcccgccacctccagcaccgcgctggcggggttctaccgcgaacaccatggc
tggctgctgggctggctgcgccgccgcacccatgacgccgactgcgccgcagacctgacc
caggacaccttcctgcgcctgctcagccgtcgcgtcgacccgaccggattgcgcctgccg
cgcgcctatctcagcaccatcgcgcacgccctgctggtcaatcactggcagcgcgcggac
ctggaacgcgcctatctggccgcactggccgcacaaccggagccggtgcatccctcggca
gaggagcgcacgcaggcgctgcagctgctgcatgccatcgccgacatgttgtccggcctg
gccgagcggccacggcgtgccttcctgctggcgcggctgtccggcctgggctatgcggag
atcggcgtgcagctcggcgtgtccgaacgcatggtcaagaagtacatggcgcaggccatg
ctgcactgcctgcgcctgtccggcgacgcggcggcatga
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