Stenotrophomonas sp. SBJS02: FQS62_015705
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Entry
FQS62_015705 CDS
T10678
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stej Stenotrophomonas sp. SBJS02
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stej03016
]
FQS62_015705 (truB)
Enzymes [BR:
stej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FQS62_015705 (truB)
Transfer RNA biogenesis [BR:
stej03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FQS62_015705 (truB)
Prokaryotic type
FQS62_015705 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WAP00766
LinkDB
All DBs
Position
complement(3367571..3368479)
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AA seq
302 aa
AA seq
DB search
MTRIQFRRLDGILLLDKSTGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEIMLGQTTDTDDAEGQVLLQRPVPSISAEALQAALVPLTGSIRQ
RAPIYSALKQGGEPLYVKARRGDVIEAPEREVHVHAIEVLEQQPERLRLRVTCGSGTYIR
SLARDLGEALGCGAHISALRRLWVEPFREPAMVTLDQLRAMVEAGDETGMDALLLPLAAG
LAEYPRIDLDADQTRRFCVGQRQRDPSWPHGLVAVFGPDDAVQGLGQVDDSGLLAPQRRF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattcagttccgccgcctggatggcatcctgctgctcgacaagtcgaccggc
atgagctccaacgccgccctgcaggtggcccgtcgcctgttccgtgccgagaagggcggc
cataccggcagccttgatccgctggccaccggcctgctgccgctgtgcttcggcgaggca
accaagatcgccggcctgctgctcggctcggccaaggcctacgacgccgagatcatgctc
ggccagaccaccgataccgatgacgccgaaggccaggtgctgctgcagcgcccggtgcct
tcgatcagcgccgaggccctgcaggcggcgctggtgccgctgaccggcagcatccgccaa
cgcgccccgatctattcggcgctgaagcagggtggggaaccgctgtatgtgaaggcccgc
cgtggggatgtcatcgaggccccggaacgcgaggtccacgtgcatgccatcgaggtgctg
gagcagcagccggaacggctgcgcctgcgggtgacctgcggctccggcacctacatccgc
agcctggcccgcgacctgggcgaggcgctgggctgtggtgcccacatcagcgcgctgcgc
cgcctctgggtcgagccattccgtgaaccggcgatggtcaccctggatcagctgcgggcg
atggtcgaggcgggtgacgagacgggcatggacgcgttgctgctgccattggcggccggc
ctggctgagtatccgcggatcgacctcgatgccgatcagacccgccgcttctgcgtcggc
cagcgccagcgcgacccgtcctggccccatggcctggtggccgtgttcggtccggacgac
gctgtccaggggttgggccaggtcgatgacagtggcctgctggccccgcagcgtcgtttc
aacctctga
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