Stenotrophomonas sp. SBJS02: FQS62_015980
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Entry
FQS62_015980 CDS
T10678
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
stej Stenotrophomonas sp. SBJS02
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stej03009
]
FQS62_015980 (rimO)
Enzymes [BR:
stej01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FQS62_015980 (rimO)
Ribosome biogenesis [BR:
stej03009
]
Prokaryotic type
ribosomal protein modification factors
FQS62_015980 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
YajR_YAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
WAP00816
LinkDB
All DBs
Position
complement(3428325..3429686)
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AA seq
453 aa
AA seq
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MSQLNPKVGFVSLGCPKALVDSERILTQLRSEGYDIVPSYDSADVVVVNTCGFIDSAVTE
SLDAIGEAMNQNGKVIVTGCLGKRPEQIREAYPNVLAVSGPQDYQSVMEAVHEALPPKHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHKCSFCIIPSMRGKLVSRPVDEVLREAERLVR
GGVRELLVVSQDTSAYGVDVKYAEKMWRNKAYQTRLKALCEGLSELDAWVRMHYVYPYPH
VDEVVPLMAENRILPYLDIPFQHASPRILRLMKRPGAVEKTLERVQNWRRIAPDITVRST
FIVGFPGETESEFEELLSFLDEAQLDRVGAFAYSPVEGATANDLPDAVPEEVKQERLARF
MEKQAQISAARLEAKIGTVQQCLVDAIEGDIAVARSKADAPEIDGLVHIQNADQVPLRVG
EFVDVEITESDEHDLYGDALPAATRPAFDLKML
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgaaccccaaagtcggcttcgtcagccttggctgcccgaaggcccttgtc
gattccgaacgcatccttacccagctccgctcggaaggctacgacatcgtcccgtcctac
gattcggccgatgtggtggtggtcaacacctgtggcttcatcgattcggcggtgaccgag
tcgctggacgcgatcggcgaggcgatgaaccagaacggcaaggtcatcgtcaccggctgc
ctgggcaagcgccctgagcagatccgcgaggcgtaccccaacgtgctggcggtgtccggc
ccgcaggactaccagagcgtgatggaagcggtgcatgaagcattgccgcccaagcacgat
ccgttcgtggacctggtgcccgactacggtatcaagctgactccgcgccattacgcttac
ctgaagatttccgaaggctgcaaccacaagtgcagcttctgcatcattccgtcgatgcga
ggcaagctggtctcgcgcccggtggatgaggtgctgcgcgaagccgaacgcctggtacgc
ggtggcgtgcgcgagctgctggtggtttcgcaggacacctcggcctacggtgtggacgtg
aagtacgccgaaaagatgtggcgcaacaaggcctaccagacccgcctgaaggcgctgtgc
gaaggcctgtccgagctggatgcgtgggtgcgcatgcactacgtctacccctacccgcac
gtggacgaagtggtgccgctgatggccgagaaccgcatcctgccgtacctggacatcccg
ttccagcacgccagcccgcgcatcctgcggctgatgaagcgccccggtgcggtcgagaag
accctggagcgcgtgcagaactggcgccgcatcgcgccggacatcaccgtgcgctcgacc
ttcatcgtcggcttcccgggcgagaccgaatccgagttcgaagagctgctgtcgttcctt
gacgaagcgcagctggaccgcgtgggcgcgttcgcctattcaccggttgaaggtgccacc
gccaacgatctgcccgatgcggtgccggaagaggtgaaacaggaacgtctggcccgcttc
atggagaagcaggcgcagatctcagccgcgcgcctggaggccaagatcggcaccgtgcag
cagtgcctggtcgacgccatcgaaggcgatatcgccgtggcccgctccaaggccgatgcc
ccggagatcgacggcctggtgcacatccagaatgccgaccaggtgccactgcgcgtgggc
gaattcgtggatgtggaaatcaccgagagcgacgagcacgacctgtacggtgacgcgctg
ccggccgccacccgcccggcattcgatctcaagatgctgtga
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