Stenotrophomonas sp. SBJS02: FQS62_017360
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Entry
FQS62_017360 CDS
T10678
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
stej Stenotrophomonas sp. SBJS02
Pathway
stej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FQS62_017360 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stej03400
]
FQS62_017360 (ruvB)
Enzymes [BR:
stej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FQS62_017360 (ruvB)
DNA repair and recombination proteins [BR:
stej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FQS62_017360 (ruvB)
RecFOR pathway proteins
FQS62_017360 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
AAA_16
AAA_22
AAA_14
nSTAND3
TIP49
AAA_33
AAA_2
NTPase_1
RNA_helicase
TsaE
AAA_18
Bac_DnaA
Rad17
NB-ARC
AAA_17
AAA_24
AAA_28
ABC_tran
DUF87
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WAP01077
LinkDB
All DBs
Position
complement(3745185..3746225)
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AA seq
346 aa
AA seq
DB search
MTDDRIIGAGATREDDAADASIRPKRLADYLGQVPVREQMEIYIQAAKGRGDALDHVLIF
GPPGLGKTTLSHVIANELGVALRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPV
VEEVLYPAMEDFQIDIMIGEGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRL
EFYSVEELTRIVRRSAAILAIDCTADGAGEIARRARGTPRIANRLLRRVRDYAQVKAGGH
IDEAVAQAAMQMLKVDPEGFDELDRRLLKTMVDYFDGGPVGIESLAAALSEERGTLEDVV
EPYLIQQGFLVRTARGRMATHKAYRHMGLKPKNPPQDLFAEVPDVG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaccgcatcatcggcgccggcgccacccgcgaggatgacgccgccgacgcc
agcatccgccccaagcgccttgccgactacctcggccaggtgccggtgcgcgagcagatg
gaaatctacatccaggcggccaaggggcgtggcgacgcgctcgaccacgtgctgatcttc
gggccgcccggcctgggcaagaccaccctcagccatgtcatcgccaacgaactgggcgtg
gccctgcgggtgacctccggtccggtgatcgagaaggccggcgacctcgctgcgctgctg
accaacctgcagccgcacgatgtgctcttcatcgacgagatccatcgcctgtcgccggtg
gtcgaggaagtcttgtacccggcgatggaagatttccagatcgacatcatgatcggcgag
ggccccgccgcccgctcgatcaagatcgacctgccaccgttcaccctgattggcgccacc
acccgtgccggcctgctgaccgcgccgctgcgcgaccgcttcggcatcgtccagcgtctg
gagttctacagcgtcgaggagctgacccggatcgtgcgccgctcggcggccattctggcc
atcgactgcaccgccgatggggcaggggagatcgcgcgccgcgcgcgtggcaccccgcgt
atcgccaaccgcctgctgcgccgcgtgcgcgactacgcgcaggtcaaggccggcggccac
atcgacgaggccgtggcacaggctgcgatgcagatgctgaaggtcgacccggagggcttc
gacgagcttgaccgccgcctgctcaagaccatggtcgactacttcgatggcggcccggtc
ggcatcgaatcgctggccgcggcactgtccgaagagcgcggcacgctggaagacgtggtc
gagccgtacctgatccagcagggcttcctggtgcgtaccgcgcgcggccgcatggcgact
cacaaggcctaccggcacatgggcctgaagccgaagaatccgccgcaggacctgttcgcg
gaggttcccgatgtcggttga
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