Stenotrophomonas sp. SBJS02: FQS62_017615
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Entry
FQS62_017615 CDS
T10678
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
stej Stenotrophomonas sp. SBJS02
Pathway
stej02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FQS62_017615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
stej02022
]
FQS62_017615
02035 Bacterial motility proteins [BR:
stej02035
]
FQS62_017615
Two-component system [BR:
stej02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
FQS62_017615
Bacterial motility proteins [BR:
stej02035
]
Pilus system
Twitching motility proteins
FQS62_017615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_19
HTH_30
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WAP01126
LinkDB
All DBs
Position
3806275..3807648
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AA seq
457 aa
AA seq
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MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPD
GNGIELVSEIAQHYPRTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHAL
ELNNTERPVPGPAAEQGARLLGASPAMDVLRTTIGKVARSQAPVYILGESGVGKELVART
IHAQGARAAGPFIPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYR
INVIELRVPPLRERRQDLPELAAAVLARLARSHGRATPLLAPSALEALAQYAFPGNVREL
ENILERALALAEEDCIGADDLRLPQHAPRAPGSAAPAEAVADLQPGSAALPSYIEQLERS
AIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacccgcagcgccctcgtcgtcgacgatgaacgcgacatccgcgaactgctg
gtactgaccctcggccgcatggggctgcgcatcagtactgccgccaacctggccgaagca
cgcgagttgctcgccagcaatccgtacgatctgtgcatcaccgacatgcggctgccggac
ggcaacggcatcgagctggtcagcgagatcgcccagcactacccgcgcacgccggtggcg
atgatcaccgcgttcggcagcatggacctggcggtggaagcactgaaggccggcgccttc
gacttcgtcagcaagccggtagacatctcggtgctgcgcggcctggtcaagcatgcgctg
gaactcaacaacaccgaacgtcccgtgcccggccctgctgccgaacaaggcgcacgcctg
ctgggtgcttcgccggccatggacgtgctgcgcaccaccatcggcaaggttgcgcgcagc
caggcaccggtctacatcctcggtgaatcgggcgtgggcaaggaactggtcgcgcgcacc
atccatgcccagggcgcacgtgcggccggaccgttcataccggtcaactgcggcgccatt
cccggcgaactgatggagagcgagttcttcggccatcgcaagggcagcttcagcggcgcc
catgccgacaagcccggcctgttccaggctgcgcacggcggcaccctgttcctggacgaa
gtggccgagctgccgttgcagatgcaggtcaagctgctgcgcgcgatccaggaaaagtcg
gtgcgagcggtcggtgcggccaatgaggagccggtggacgtacgcatcctctcggccacc
cacaaggacctggccgagctggtcgaggatgggcgcttccgccacgacctgtactaccgc
atcaacgtgatcgaactgagggtgccgccgctgcgcgagcgccgccaggacctgccggaa
ctggccgccgcggtactggcacgcctggcccgcagccatggccgtgctaccccgctgctg
gcgccttcggcgctggaggcactggcgcagtacgccttccccggcaacgtgcgcgaactg
gagaacatcctggaacgcgcgctggccctggccgaggaagactgcatcggcgccgatgac
ctgcgcctgccgcaacacgcgccgcgtgcgccgggcagtgccgcgcccgccgaagccgtg
gccgacctgcagcccggcagcgccgccctgccctcgtacatcgagcagctggagcgcagc
gccatccagcgcgcgctggaagagaaccgctggaacaagactcgcactgctgcgcagctg
gggattaccttccgcgcactgcgctacaagctgaagaagctggggatggagtaa
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