Stenotrophomonas sp. SBJS02: FQS62_021695
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Entry
FQS62_021695 CDS
T10678
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stej Stenotrophomonas sp. SBJS02
Pathway
stej03420
Nucleotide excision repair
stej03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FQS62_021695 (uvrD)
03430 Mismatch repair
FQS62_021695 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stej03400
]
FQS62_021695 (uvrD)
Enzymes [BR:
stej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FQS62_021695 (uvrD)
DNA repair and recombination proteins [BR:
stej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FQS62_021695 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FQS62_021695 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DUF3553
Motif
Other DBs
NCBI-ProteinID:
WAP01866
LinkDB
All DBs
Position
complement(4704886..4707078)
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AA seq
730 aa
AA seq
DB search
MDVSHLLDGLNPAQREAVSAPPGHHLVLAGAGSGKTRVLTHRIAWLHEVDGVPTHGIFAV
TFTNKAAGEMRHRIDAQLPNGSRGMWIGTFHGLANRLLRLHWQDAKLPEGFQVMDSDDQL
RLVKRVVQALELDDGKYPAKQIAWWINAQKDEGRRPQHIQPEPHDAWLETMRQAYIEYQA
RCDRAGLVDFAELLLRAHELLRDNPALLSHYRARFREILVDEFQDTNAIQYAFVRVLAGD
SGHVFVVGDDDQAIYGWRGAKVENVQGFLRDFPGAQTIRLEQNYRSTANILGAANAVIAH
NPDRIGKQLWTDSGDGEPIDLYAAYNEMDEARYIVERARQWVRDGGSYTEVAVLYRSNAQ
SRALEEALLSEQVPYRVYGGMRFFERAEIKDALAYLRLLSNRNDDAAFERAVNTPTRGIG
DRTLDEVRREARAQGISLWEATMLVTQGSALAARARNALAGFLVLVNELQAQTVHMTLAE
RVDHVLARSQLREHWSKESRNSLDSESRTDNLDELVSVASRFVRRADDIEEVGEDMDELV
AFLAYAALEAGEGQAQAGEDGVQLMTLHSAKGLEFPLVFLAGMEDGLFPSARSLEESGRL
EEERRLAYVGITRARQKLVLSYAESRRIHGQDNYSLPSRFLREIPRELLHEVRPKVQVSR
PASMGASRVMGHASIEAPPVKLGALVTHPKFGEGMVTDYEGSGAHARVQVEFADAGSKWL
VMAYANLTVI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgcttgatggcctgaacccggcccagcgcgaagccgtctccgct
ccccccggccaccacctggtgctggccggtgccggttccggcaagacccgcgtacttacc
caccgcatcgcctggctgcatgaagtcgatggcgtgccgacccacggcattttcgcggtg
accttcaccaacaaggcggccggcgaaatgcgccaccgcatcgacgcacagctgcccaac
ggcagccgtggcatgtggatcggtaccttccacggcctggccaaccgcctgctgcgcctg
cactggcaggacgcgaagctgcccgaaggcttccaggtgatggactcggacgaccagctg
cggctggtcaagcgcgtggtgcaggcgctggagctggacgacggcaagtacccggccaag
cagattgcatggtggatcaacgcacagaaggacgagggccgtcgcccgcagcacatccag
cccgagccgcacgatgcgtggctggaaaccatgcgccaggcttacatcgaataccaggcg
cgctgcgaccgcgccggcctggtggacttcgccgagctgctgctgcgcgcgcatgaactg
ctgcgcgacaacccggcgctgctgtcgcactaccgcgcccgcttccgcgagattctggtg
gacgagttccaggacaccaacgccatccagtacgccttcgtgcgggtgctggccggtgat
tccggccacgtgttcgtggtcggcgatgatgaccaggccatctacggctggcgcggtgcc
aaggtcgagaacgtgcagggcttcctgcgtgacttccccggtgcgcagaccatccgcctg
gaacagaactaccgctccaccgccaacatcctcggcgccgccaatgcggtgatcgcgcac
aatccggatcgcatcggcaagcagctgtggaccgacagtggcgacggcgagccgatcgac
ctgtacgccgcgtacaacgagatggacgaggcgcgctacatcgtcgagcgcgcccgccag
tgggtgcgcgatggtggcagctacaccgaagtggccgtgctctaccgcagcaacgcgcag
tcgcgcgcgctggaagaagcgctgctgagcgaacaggtgccgtaccgcgtgtacggcggc
atgcgcttcttcgagcgtgccgaaatcaaggatgcgctggcctacctgcgcctgctgtcc
aaccgcaacgatgacgccgccttcgagcgcgcggtcaatacgcccacccgtggcatcggc
gaccgcacgctggacgaagtgcgccgcgaggcgcgcgcgcagggtatttcgctgtgggaa
gcgaccatgctggtcacccagggcagcgcgctggccgctcgtgcgcgcaatgcgctggct
ggcttcctggtgctggtcaacgagctgcaggcgcagaccgtgcacatgaccctggccgag
cgcgtggaccacgtgctggcccgctcgcagctgcgcgagcactggagcaaggaaagccgc
aattcgctggattcagaatcgcgcacggacaacctcgacgaactggtctcggtcgcctcg
cgcttcgtgcgccgcgccgatgacatcgaggaagtgggcgaggacatggacgagctggtc
gcgttcctggcctacgccgcgctggaggccggtgagggccaggcgcaggcgggcgaggac
ggggtgcagctgatgaccctgcactcggccaagggcctggaattcccgctggtgttcctg
gcgggcatggaagacggcctgttccccagcgcacgttcgctggaagaaagcgggcggctg
gaggaagaacgccgcctggcctacgtcggcatcacccgcgcgcgccagaagctggtgctg
agctacgccgagtcgcgccgcatccacggccaggacaactacagcctgccgtcgcgcttc
ctgcgcgagattccgcgcgagctgctgcacgaagtgcgcccgaaggtacaggtctcgcgg
ccggcctcaatgggtgccagccgggtgatgggccatgcctcgatcgaggcgccgccggtc
aagctcggcgcgctggtcacccatcccaagttcggcgagggcatggtgaccgactacgaa
ggcagcggcgcccacgcccgcgtgcaggtcgagtttgccgatgccggcagcaagtggctg
gtgatggcgtacgccaacctgacggtgatctga
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