Stenotrophomonas sp. SBJS02: FQS62_022080
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Entry
FQS62_022080 CDS
T10678
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
stej Stenotrophomonas sp. SBJS02
Pathway
stej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FQS62_022080 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stej03400
]
FQS62_022080 (recC)
Enzymes [BR:
stej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FQS62_022080 (recC)
DNA repair and recombination proteins [BR:
stej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FQS62_022080 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
NNH6
Motif
Other DBs
NCBI-ProteinID:
WAP01928
LinkDB
All DBs
Position
complement(4802704..4806051)
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AA seq
1115 aa
AA seq
DB search
MMSDPGSDFRLYHSNSLDVLAALLARNVRAPVSGQPLLAPEVVLIPQVAMRRWLQATLAA
EFGVAANLEFLTPGEFVARALKANVSGEQDDLDAAGLHWKLYQALRDPHLLAQPPMRALQ
SYLAGDDALKPWALAGELASVFEKYQAWRRDWLLRWAAGADPADPQAILWRTITRGHDYR
ARRIQEYLDRFEGAGQPLPQGLPPRMSAFATLNISPDVLRVMATQARVGELHFYMPTPVQ
SYWGDLQTLAERLRSGAPDPFGEAAGENRLLEAWGAAGRDFMAVLGSYEVVHPSGEIAAY
SDPEEDTRPTLDEGGLSDSLLHRLQRDLFHRRALPSGEVREALRSDDPSLQVHACHTRLR
ELQVLHDQLRSLLQDPRFDPPLQAREIAVLAPDIDPYVPYLEAVFGGRGGEEEHIPYALA
DSSPLAGEPLADVFVHLLGLPVSRFGLNEVLDLLASAPLAEAAGLEAVDFDRLHGWLQQA
GARWGLDAKHRNQHQAPADDAYTWQFALDRLVLGHATGSEADLAGVAPWIELEGGALDAL
DRLLRLLRVLAIYQRRLGELLTPAQWRQRLLSLLDALLPTAPTSPNSQRALERLRKLLNQ
FADDAAKAGFEDGVPPEVVRSHFAGALGEADTRAPLLTGGISFGRMVPMRLLPFRVICVL
GLNDGDFPRRDPAAGLNQLTAELDTPRRRPGDRSTREDDRFLFLQLFAAAQEVFYLSYLG
ADPRDGSVREPSVLVSELIDAAAAYHLDPPAAVRDFTVRHALQPFSPAAFGDGDPRRFSY
RRQWHPAAGRLTGQRGGLQPWFDASLPPPLDDAVEDEVALDTLRRFLCDPAGQFLAQSLG
LRLVDDVEEVDDLEPLVLSSRGPEKRSVQAAVVRATLSGDTEPLYPRLRARGLLPSGPLG
ERQFEVEQLKTRPYASALLGWMQGEPLESRRYEVEIDGVRLHGRVADRHPEGLVRLRAGT
LNGNAVIRHGLDWLLANAAGDALPLVQFHDGGDAGPGPHVLPALSVPAARAALRALLQLR
QRGLREPLRFAPYTGWVLYNAPAEKQRSEGWKQWHGSDRTWGESSSDAWQLLLRGADPFA
TDASYADLLRNSQVVFSAVREGRALGTEARQEGSA
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgacccaggcagcgatttccgcctctaccattccaactccctggacgtgctg
gccgcgctgctggcacgcaacgtgcgtgcgccggtttcgggccagccgctgctggcgccg
gaagtggtgctgatcccgcaggtggcgatgcggcgctggctgcaagcgacactggccgcg
gagttcggcgtcgccgccaacctcgaattcctgactccaggcgagttcgtggcccgggcg
ctgaaggccaacgtcagcggtgagcaggacgatctggacgcggccggcctgcactggaag
ctgtaccaggcactgcgcgacccgcatctgctggcgcagccaccgatgcgcgcgctgcag
tcctatcttgccggcgatgacgcgttgaagccgtgggcgctggccggcgagttggcctcg
gtgttcgagaaataccaggcctggcggcgcgactggctgctgcgctgggcggccggcgcc
gatccggccgacccgcaggcgatcctgtggcgcaccatcacccgtggccacgactaccgc
gcccgccgcatccaggagtacctggaccgcttcgaaggcgccggccagccgctgccgcag
ggcttgccgccgcgcatgtctgcgttcgcgacgctcaacatctcgcccgacgtgctgcgg
gtgatggccacccaggcgcgggtaggcgagctgcatttctatatgcctaccccggtgcag
tcgtactggggcgacctgcagacgctggccgagcgcctgcgcagcggcgcgcccgatccc
ttcggtgaagcggccggcgagaaccgcctgctggaagcctggggtgcggctggccgcgat
ttcatggcggtgctgggcagttacgaggtggtgcacccgtccggcgagatcgccgcctat
tccgatccggaggaggacacccggccgacgctggacgaaggcggcctgtccgacagcctg
ctgcatcgcctgcagcgtgacctgttccaccgtcgcgcattgccctcgggtgaggtgcgc
gaggctctgcgcagcgacgatcccagcttgcaggtgcatgcctgccatacccgcctgcgc
gagctgcaggtactgcacgaccagctgcgcagcctgctgcaggacccgcgcttcgacccg
ccgctgcaggcgcgcgagatcgcggtgctggcgccggacatcgatccctatgtgccgtac
ctggaagcggtgttcggcggtcgtggcggcgaggaggagcacattccgtatgcgctggcc
gacagcagtccactggcaggcgagccgttggccgatgtgttcgtgcatctgctgggcctg
ccagtctcgcgctttggcttgaacgaagtgctggacctgctggccagcgcgccgctggcc
gaagcggccgggctggaagcggtggatttcgaccgcctgcatggctggctgcagcaggcc
ggcgcacgttggggcctggacgcgaaacaccgcaaccagcaccaggcaccggccgacgac
gcctacacctggcagttcgccctggatcgcctggtactcggtcatgccaccggtagcgag
gccgacctggccggggtggcgccgtggatcgaactggaaggcggcgcgttggatgcgctg
gaccggctgctgcgcctgctgcgcgtgctggccatctaccagcgccgcctgggcgaactg
ctgaccccggcgcagtggcggcaacgcctgctgtcgctgctggatgcgctgctgccaacc
gcgcccacctcgcccaacagccagcgcgcgctggagcggctgcgcaagctgctcaaccag
ttcgccgacgatgccgccaaggccggtttcgaagacggcgtgccgccggaggtggtgcgt
tcgcacttcgccggcgcgctgggcgaggccgatacacgcgcaccgctgctgaccggtggc
atcagcttcggccgcatggtgccgatgcgcctgctgccgttccgggtgatctgcgtgctg
ggcctcaatgatggcgatttcccgcgccgcgacccggcggccggtctcaaccagctcacc
gccgagctggacacgccgcgccgccgtccgggcgaccgctccacccgcgaggatgatcgc
ttcctgttcctgcagctgtttgccgccgcgcaggaggtgttctatctcagctatctcggc
gccgatccgcgcgatggcagcgtgcgcgaaccgtcggtgctggtcagcgaactgatcgat
gccgccgccgcgtatcacctcgatccgcctgcagcggtccgtgacttcaccgtgcgtcat
gccctgcagccgttctcaccggcggcgttcggcgatggtgatccacgccgtttcagctat
cgccgccagtggcatccggccgccggtcgcctcaccggccagcgcggtggcctgcagccg
tggttcgatgcttcgttgccgccgccgctcgacgatgcggtggaagacgaagtcgcgctc
gataccctgcgccgcttcctgtgcgacccggccgggcagttcctcgcacagtcgctgggc
ctgcgcctggtcgacgacgtcgaggaagtcgatgacctggaaccgctggtgctgtcctcg
cgcgggccggaaaagcgcagcgtgcaggccgcggtggtacgtgccacgctcagcggcgat
accgagccgttgtacccgcggctgcgcgcgcgcggcctgctgccgtccggcccattgggc
gagcgccagttcgaggtggaacaattgaagacccgcccgtatgccagtgcgttgctgggc
tggatgcagggcgaaccgctggaaagccgtcgctacgaagtggagattgatggcgtgcgc
ctgcatggccgcgtcgccgatcggcatccggaagggctggtgcgcctgcgtgcgggcacg
ctcaatggcaatgcagtgatccgccacggcctggactggctgctggcgaacgctgcgggc
gatgcgctgccgcttgtgcagttccacgatggcggcgacgccggtcccggcccgcatgta
ctgccggcactgagcgttcccgctgcacgtgcggcgctgcgtgcgctgctgcagctgcgc
cagcgtggcctgcgcgagccgctgcgctttgccccgtacaccggctgggtgctgtacaac
gcgccggcagaaaagcagcgcagcgaaggctggaagcagtggcacggcagcgaccgcacc
tggggtgaatccagcagcgacgcctggcagctgctgctgcggggtgccgacccgttcgct
accgatgccagctacgccgacctgctgcgcaacagccaggtggtcttcagcgcggtgcgc
gaaggccgcgctctcggcaccgaagcacgccaggagggcagcgcatga
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