Stenotrophomonas sp. KCTC 12332: AXG53_02045
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Entry
AXG53_02045 CDS
T04408
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stek03009
]
AXG53_02045
Enzymes [BR:
stek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AXG53_02045
Ribosome biogenesis [BR:
stek03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AXG53_02045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AMJ55553
LinkDB
All DBs
Position
467601..469250
Genome browser
AA seq
549 aa
AA seq
DB search
MSDTPRKPSLNKLSLKREADTEQQPKLEERLHKVLAQAGLGSRRALEQRIADGLVKVNGE
VAQTGMSVKSGDKIDLDGRSFVASALTDPSRVLIYNKPEGEVTTRDDPEGRPTVFEALPP
LKGARWIAIGRLDINTTGLLLATTDGELANAMMHPSFEVEREYVVRVRAPEGEEKVSDEI
IERLGRGVLLEDGGAKFDEVERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKR
TRYGKIELPRELMRGKSVELTTQQVDALRAQLKLEEGTPSALTLQPVIGQRKAVKTTLRV
SREGGRGNAYVNGHNSADEGRELRRFDNLREDRGGRGRGGKSGGGFKGGLTVSGEAAAKQ
SQKPFKQRKPAGDRSLPDGNPAAFRTWYVPDGVSTGPSGHRNAGPGAARGPGGNRGPGRG
PAADGQARPYGKPRPGGAPGAGRGGPGQGRPGAGGQGASQGQGQGQRKHPYGHPGNAPSF
PSDHANPGFSPYGARPAGNRPSGGNRGPGGPGGRPSGGPRPGGNRPGGAGRPGGGGRPGG
GGNRGPRGA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgtaaaccttcgttgaacaagctctcgctcaagcgcgaagccgac
accgaacagcagcccaagctcgaagagcgcctgcacaaggtcctggcacaagccggcctg
ggctcgcgccgcgcgctggagcagcgcatcgccgacggcctggtcaaggtcaatggcgaa
gtcgcgcagaccggcatgtcggtcaagagcggcgacaagatcgaccttgatggtcgcagc
tttgtcgccagcgccctgaccgacccgtcgcgcgtcctgatctacaacaagcccgaaggc
gaagtcaccacgcgtgacgatcccgaaggccggccgaccgtattcgaagcgctgccgccg
ttgaaaggcgcacgctggatcgccatcggccgcctggacatcaacaccaccggcctgctg
ctggctactaccgacggtgagctcgccaacgcgatgatgcacccgtcgttcgaagtcgag
cgcgagtacgtggtacgtgtccgcgcaccggaaggcgaagagaaggtctccgacgaaatc
atcgagcgcctcggccgcggtgtgctgctggaagacggcggcgccaagttcgacgaagtc
gagcgcatcggcggcaccgactcgcacgactggttccgcgtggtcgtcaaggaaggccgc
aaccgcgaagtgcgccgcctatgggaatcgcagggctgccaggtcagccgcctgaagcgc
acccgctacggcaagatcgagttgccgcgtgaactgatgcgcggcaagtcggtggaactg
accacccagcaggtcgacgcgctgcgcgcccagctcaagctggaagaaggcaccccgtcg
gcactgaccctgcagccggtgatcggccagcgcaaggcggtcaagaccaccctgcgcgtg
tcgcgcgaaggcggccgtggcaatgcttacgtcaacggccacaacagcgccgacgaaggc
cgcgaactgcgccgcttcgacaacctgcgcgaagaccgcggcggccgtggccgtggcggc
aagagcggcggcggtttcaagggcggcctgacggtcagcggcgaagccgcggccaagcag
tcgcagaagccgttcaagcagcgcaagcccgccggcgaccgcagcttgccggatggcaac
ccggccgcattccgcacctggtacgtgccggacggtgtcagcaccggcccgagcggccac
cgcaatgcaggtccgggcgcagcacgcggcccgggcggcaatcgtggtccgggccgtggc
ccggccgctgatggccaggcccgtccctacggcaagccgcgtccgggcggcgccccgggt
gctggccgtggcggtcccggccaggggcgtccgggtgctggtggccagggtgcaagccag
ggtcaaggccagggccagcgcaagcacccctacggtcacccgggcaatgccccgagcttc
ccgtccgaccacgccaacccgggcttcagcccgtacggcgcacgtccggccggcaatcgc
ccgagcggcggcaaccgtggcccgggtggccccggcggtcgtccctccggtggcccgcgc
ccgggtggcaaccgccccggcggcgcaggccgtccgggtggcggtggtcgtcccggcggt
ggtggcaaccgcggtccgcgcggcgcctga
DBGET
integrated database retrieval system
