Stenotrophomonas sp. KCTC 12332: AXG53_05530
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Entry
AXG53_05530 CDS
T04408
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek00730
Thiamine metabolism
stek01100
Metabolic pathways
stek01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AXG53_05530
Enzymes [BR:
stek01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AXG53_05530
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AMJ56163
UniProt:
A0A126NGY2
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All DBs
Position
complement(1295673..1297547)
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AA seq
624 aa
AA seq
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MNAQPSLQQQAQQLSESVTRPIPGSCKVFVSGSRPDLQVPMREIAQTRTPTLFGGEENPP
VTVYDTSGPYTDPQANIDLAAGLAAVRARWIEERGDTEQLAGLSSDFGRARQHDARLDAV
RFPGRMLPRRAMAGANVTQMHYARRGIVTPEMEYVAIRENQRLDAVRDAGLLAQHPGQSF
GANIQQIITPEFVRDEIARGRAVLPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGIA
EEVEKLVWAIRWGGDTVMDLSTGKHIHETREWIVRNSPVPIGTVPIYQALEKVDGRAEEL
NWEIFRDTLTEQAEQGVDYFTIHAGVLLRHVPLTAKRVTGIVSRGGSIMAKWCLAHHKEN
FLYTHFEDICDIMKAYDVSFSLGDGLRPGCIADANDAAQFGELEALGELTKIAWKHDVQT
IIEGPGHVPMQLIKQNMDKQLQECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGT
AMLCYVTPKEHLGLPNRQDVRDGIMAYKIAAHAADLAKGHPGAQVRDNALSKARFEFRWE
DQFHLGLDPEKAKEYHDETLPKDAHKLAHFCSMCGPHFCSMKITQDVREYAAEQGVEEAQ
ALTAGMAEKSAQFRAQGAEVYRVE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacagcccagcctgcagcagcaggcccagcaactctccgaatccgtgacccgg
ccgattcccggctcgtgcaaggtcttcgtcagcggttcgcggccggatctgcaggtgccg
atgcgcgaaatcgcgcagacccgtacgccgaccctgttcggtggcgaggagaacccgcct
gtcaccgtctatgacacctccggcccgtataccgatccgcaggccaatatcgatcttgcc
gccgggctggcagcggtgcgtgcgcgctggatcgaggaacgtggcgataccgagcagctt
gcgggtttgagttccgacttcggccgtgcccgccaacatgacgccaggctcgatgcggtg
cgcttcccggggcgcatgctgccgcgccgtgccatggctggtgccaatgtcacccagatg
cactacgcacgccgtggcatcgttacgccggagatggagtacgtggccatccgcgagaac
cagcggctggatgcggtgcgtgacgccggcctgctggcgcagcaccccgggcagagtttc
ggcgccaacatccagcagatcatcacgcccgaattcgtgcgcgacgagatcgcacgcggc
cgcgcggtgctgccgaacaacatcaaccacccggaaagtgagccgatgatcattggccgc
aacttcctcaccaagatcaacgccaatatcggcaacagcgcggtgtcttccggtattgcc
gaggaagtggaaaaactggtgtgggcgatccgctggggcggtgacacggtgatggatctt
tccaccggcaagcacatccatgaaacccgcgaatggatcgtgcgcaactcgccggtgccg
atcggcaccgtgccgatctatcaggcgctggagaaagtggatggccgcgccgaggagctg
aactgggaaatattccgcgacaccttgaccgagcaggccgagcagggcgtggactacttc
accatccatgccggcgtgctgctgcggcatgtgccgctgaccgccaagcgcgttaccggc
atcgtctcgcgcggtggctcgatcatggccaagtggtgcctggcgcaccacaaggagaac
ttcctctatacgcacttcgaggacatctgcgacatcatgaaggcttacgacgtgtccttc
agcctcggtgacgggctgcgcccgggctgcattgccgacgccaacgatgcggcgcagttc
ggtgagctggaagcgcttggcgagctgaccaaaattgcctggaagcacgatgtgcagacc
atcattgaaggcccgggtcacgtgccgatgcagctgatcaagcagaacatggacaagcag
ctgcaggaatgcggtgaagccccgttctataccctggggccgttgaccaccgacatcgcg
cccggttacgaccacatcaccagcgcgatcggcgcggcgatgatcggctggtatggcacg
gcgatgctctgttatgtgacgccgaaggaacacctgggcctgcccaaccggcaggacgtg
cgcgacggcatcatggcctacaagatcgccgcgcatgccgccgatctggccaagggccat
ccgggcgcgcaggtccgtgacaatgcactgagcaaggcgcgtttcgagttccgctgggag
gaccagttccatctcggcctggatccggagaaggccaaggagtaccacgacgaaaccctg
cccaaggatgcccacaagctggcccatttctgctcgatgtgcggcccgcatttctgctcg
atgaagatcacccaggacgtgcgtgagtacgcggccgaacagggggttgaagaagcgcag
gcattgacagcaggcatggcagagaagtcggcgcagttccgcgcgcagggcgctgaggtc
taccgggtcgagtag
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