Stenotrophomonas sp. KCTC 12332: AXG53_07415
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Entry
AXG53_07415 CDS
T04408
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AXG53_07415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stek03021
]
AXG53_07415
Transcription machinery [BR:
stek03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXG53_07415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF4611
Motif
Other DBs
NCBI-ProteinID:
AMJ56495
LinkDB
All DBs
Position
complement(1738441..1740288)
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AA seq
615 aa
AA seq
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MANERPAQQNDIKLLISKGLEQGYLTYAEVNDHLPDDMVDPEQIEDIIGLITGMGIDVHE
VAPDADTLMLSDGNTGNREVDDTAAEEAAAALTALDTEGGRTTDPVRMYMREMGTVELLT
REGEIAIAKRIEEGLGQVQAALGTFPLAVESVLADYELHKEGKKRLAEVIVGFNDLVEEA
PAPAVAEDTSDDAAEDGDEDADGDDVEEEAGPTGPDPVEVANRMEQLASDLAKFKKAHAK
GDTKAQTKLREEISATFVTLKLPLPLTDVLVRLLRETMGQVKAQERRVLHLATITARMPR
KDFIRSWEGNQTNLEWVEDAIKRKQKWSSALRDVKDQIVSEQQATIDLEKNTQLSLDELK
EISRVMAYGEAKARKAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF
EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQYGREAT
PEELAKEMDMPEDKIRKVMKIAKEPISMETPIGDDEDSHLGDFIEDTNVESPIENTTNIN
LSETVRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
HPSRSEQLRSFLDIE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgaacgtcctgcccagcaaaacgacatcaagcttctgatcagcaagggcctg
gaacagggctacctgacctacgccgaagttaatgaccatctgcccgacgacatggtcgac
ccggagcagatcgaagacatcatcggcctgatcaccggcatgggcatcgatgtccatgaa
gttgcccccgacgccgacacgctgatgctcagcgacggcaacaccggcaaccgtgaagtc
gatgataccgcggccgaagaagctgctgccgcacttaccgcactcgacaccgaaggtggc
cgcaccaccgacccggtgcgcatgtacatgcgcgaaatgggtaccgtcgagctgctgacc
cgcgaaggcgaaatcgccatcgccaagcgtatcgaagaaggcctgggccaggtgcaggct
gcactgggcaccttcccgctggccgttgaatcggtactggccgattacgaactgcacaag
gaaggcaagaagcgcctggccgaagtgatcgtcggcttcaacgacctggtggaagaggcg
ccggctccggccgttgccgaagacaccagcgatgacgctgccgaagacggcgacgaagac
gctgacggcgacgacgtcgaggaagaggccggcccgaccggtccggatccggtcgaagtc
gccaaccgcatggagcagctggccagcgaccttgccaagttcaagaaggcccacgccaag
ggtgacaccaaggcccagaccaagctgcgcgaggaaatctcggccaccttcgtgaccctg
aagctgccgctgccgctgaccgacgtgctggtccgcctgctgcgcgagaccatgggccag
gtcaaggcacaggagcgccgcgtgctgcacctggccaccatcaccgcccgtatgccgcgt
aaggatttcatccgctcgtgggaaggcaaccagacgaatctggagtgggtggaagacgct
atcaagcgtaagcagaagtggtcgtcggccctgcgtgacgtcaaggaccagatcgtgtcc
gagcagcaggccaccatcgacctggaaaagaacacccagctgagcctggacgagctgaag
gaaatcagccgcgtcatggcctacggcgaagccaaggcccgcaaggccaagaaggaaatg
gtcgaggccaacctgcgcctggtcatctccatcgccaagaagtacaccaaccgcggcctg
cagttcctggacctgatccaggagggcaacatcggcctgatgaaggccgtggacaagttt
gaataccgccgcggttacaagttctcgacctatgccacctggtggatccgtcaggcgatc
acccgttcgatcgccgaccaggcccgcaccatccgtattccggtgcacatgatcgagacg
atcaacaagttgaaccgcatttcccgccagatgctccagcagtacggccgcgaggccacg
ccggaggagctggccaaggaaatggacatgccggaagacaagatccgcaaggtgatgaag
atcgccaaggagccgatctcgatggaaaccccgatcggcgacgacgaggactcgcatctg
ggcgacttcatcgaggacaccaatgtggagtccccgatcgagaacaccaccaacatcaac
ttgtcggaaaccgtgcgtgacgtgctggctggcctcaccccgagggaagccaaggtgctg
cgcatgcgcttcggcatcgacatgaacaccgatcacacgctggaagaagtgggcaagcag
ttcgacgtgacccgcgagcgcatccgccagatcgaggccaaggcgctgcgcaagctgcgt
cacccgagccgttcggagcagctgcgcagcttcctcgacatcgagtga
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