Stenotrophomonas sp. KCTC 12332: AXG53_08790
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Entry
AXG53_08790 CDS
T04408
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AXG53_08790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stek03019
]
AXG53_08790
03009 Ribosome biogenesis [BR:
stek03009
]
AXG53_08790
Messenger RNA biogenesis [BR:
stek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AXG53_08790
Ribosome biogenesis [BR:
stek03009
]
Eukaryotic type
Pre-60S particles
RNases
AXG53_08790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AMJ56724
LinkDB
All DBs
Position
complement(2070186..2070761)
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AA seq
191 aa
AA seq
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MADNSAGNDRLIWIDLEMTGLDTDNDSIIEIATVVTDGQLNVLAEGPEFAIHHSVEVLEA
MDEWNRNQHQRSGLWQRVLDSSTSVGQAEAKTIAFLQEWIKAGASPMCGNSICQDRRFLH
RQMPRLEKYFHYRNLDVSTIKELAKRWSPAIAAGVNKTSSHTALSDVHDSIAELRHYRQF
MGALAGLPEAG
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacagcgcaggcaatgaccggttgatctggattgatctggaaatgaccgga
ttggacacggacaacgactccatcatcgagatcgccaccgtggtcaccgatggccagctc
aatgtgctggccgaagggccggaatttgccatccatcattccgtggaggtgctggaagcc
atggacgagtggaaccgcaaccagcaccagcgctccgggttatggcagcgcgtgctcgac
agcagcaccagcgtaggccaggccgaagccaaaaccattgccttcctgcaggagtggatc
aaggccggcgcgtcgccgatgtgtggcaactcgatctgccaggaccggcgtttcctgcac
cgtcagatgccgcgcctggagaagtacttccattaccgcaacctcgacgtgtccacgatc
aaggaactggccaagcgctggtcgcctgccattgccgccggggtcaacaagacctccagc
cataccgcgctgagcgacgtgcacgattccatcgccgagctgcgccactaccgccagttc
atgggcgcgttggccgggctgccggaagcgggctga
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