Stenotrophomonas sp. KCTC 12332: AXG53_10105
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Entry
AXG53_10105 CDS
T04408
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stek03009
]
AXG53_10105
Enzymes [BR:
stek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
AXG53_10105
Ribosome biogenesis [BR:
stek03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AXG53_10105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
PRDA1_C
Motif
Other DBs
NCBI-ProteinID:
AMJ56960
LinkDB
All DBs
Position
complement(2398018..2398989)
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AA seq
323 aa
AA seq
DB search
MTDSDKPQAPPAAKSSVRMIKVPEDRAGQRLDNFLLGQLKGAPRSLVYKLVRSGQVRVNG
GRAKADRKLDGGEEVRIPPVNLNEIGDKAPPPASFLQRMEEAIVFEDAKLLVINKPTGVA
SHGGSGISHGAIETMRALRPNMNLELVHRLDRDTSGLLIIAKKRSALVELQALLREDHGG
IQKRYLTLLAGRMPDGVMSVDAPLHVGLRQGGERHVQVNAIGKPSLSHFKVLERRGGQSY
CEVRIETGRTHQIRVHAQHIGHPVAGDDKYGDPAVNKRFREQIGLKRLFLHAASLEFALD
GGKTPYVLNAPLPPDLVDAMNKL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgactgattccgacaagccccaagcaccgcctgccgccaagagcagcgtgcgcatgatc
aaagtacccgaagacagggcaggacaacggctggacaactttttgttgggccaattgaag
ggtgcgccacgcagcctggtatacaaactggtgcgcagcgggcaggtccgtgtgaacggt
ggccgtgccaaggctgaccgcaagctggacggtggggaggaggtccgtattccgccggtc
aatctcaatgagattggagacaaggcgccgcctccggcaagtttcctgcagcgcatggag
gaggccatcgttttcgaggatgccaagctgctggtgatcaacaagccgaccggtgtggcc
agccatggcggcagcggtatcagccacggtgcgattgaaacgatgcgcgcgctgcggccg
aacatgaacctggagctggtgcaccggctggaccgggatacctccggcctgctgatcatc
gccaagaagcgttcggccctggtcgagctgcaggccttgctgcgtgaagaccatggcggc
atccagaagcgttacctgaccctgctggccgggcgcatgcccgatggtgtgatgagcgta
gatgcaccgttgcatgtggggctccgccagggcggcgagcgccatgtgcaggtgaatgcg
atcggcaagccgtcgctgagccatttcaaggtgctggagcgccgcggcggccagtcctac
tgcgaagtccggatcgaaaccggccgcacccaccagatccgcgtgcatgctcagcatatt
ggtcacccggtggcgggtgacgacaaatacggcgatcctgcagtcaacaagcgctttcgt
gagcagatcgggctcaaacgcctgttcctgcacgcggcctcgctggagttcgcgctggat
ggtggcaagacaccttatgtattgaatgcaccgctgccgccggatctggtggatgcgatg
aacaagctttga
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integrated database retrieval system
