Stenotrophomonas sp. KCTC 12332: AXG53_10345
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Entry
AXG53_10345 CDS
T04408
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stek03016
]
AXG53_10345
Enzymes [BR:
stek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AXG53_10345
Transfer RNA biogenesis [BR:
stek03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AXG53_10345
Prokaryotic type
AXG53_10345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AMJ57002
UniProt:
A0A126NN93
LinkDB
All DBs
Position
complement(2443135..2444226)
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AA seq
363 aa
AA seq
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MNALPLAFGAPLLTAAIRSVPEDFQVDEIPAFEATGEGEHLLLDIRKRNANTVAIAKQLA
QWAGVPEMGVSYAGQKDRHAVTTQRFSVHLPKRVAPDLALLESDELHVLASTWHNRKLQR
GALAGNRFKLVLRGVQGDKAAIEERLQIVAARGLPNWFGEQRFGRDGGNVPAALQMFAGR
RVRKDQRSMLLSAARSALFNRVLAARVEQGSWDSALDGEVWMLDGSRSVFGPEPMNDVLA
ERLGRFDIHPSAPLWGVGELRATGGALALEEQALADEQAMALRAGLEQAGLKQERRSLRL
KPSLMQHQWLADDVLEVAFALPPGCYATAVLHELGEVSDASRNEIAGSAPVEAEAPSAED
AAD
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgctgccgttggcgtttggtgcgccgctgctgaccgctgcgatccgcagcgtg
ccggaagatttccaggtggatgaaattccggccttcgaggcgaccggcgagggcgagcat
ctgctgctggacatccgcaagcgcaatgccaataccgtggccatcgccaagcagttggcg
caatgggccggcgtgccggaaatgggcgtcagctatgccgggcagaaagatcgccatgcg
gtgaccacgcagcgcttcagtgtgcacctgcccaagcgcgtggcgccggacctggccttg
ctggaatcggacgaactgcatgtgctggcgtcgacctggcacaaccgcaagctgcagcgc
ggcgcgttggccggcaaccgcttcaagctggtgctgcgcggcgtgcagggtgacaaggcg
gcaatcgaagaacgcctgcagattgttgcagcacgcggcctgcctaactggttcggtgag
cagcgctttggtcgcgacggcggtaacgtgccggctgcgctgcagatgtttgccggccgc
cgggtgcgcaaggatcagcgctcgatgctgctgtcggcggcccggtcggcgctgttcaat
cgcgtgctggccgcgcgcgtggagcagggtagctgggactcggcgttggacggcgaggtg
tggatgctggacggcagccgttcggtattcgggccggaaccgatgaacgacgtgctggcc
gagcggctggggcgctttgatattcatccgagtgcgccgttgtggggtgttggtgaactg
cgcgcgaccggcggcgccctcgcgctcgaagagcaggcactggctgatgagcaggccatg
gccctgcgcgcggggctggagcaggccgggctcaagcaggagcgccgctcgctgcgattg
aagccctcgctgatgcagcatcaatggctggctgacgatgtactggaagtagcgttcgcc
ctgccaccgggctgctatgccacggcggtgctgcacgaattgggcgaagtgagcgacgca
agccgcaatgaaattgcgggtagcgcgccagttgaagccgaagcgcccagcgcagaagac
gccgccgactaa
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