Stenotrophomonas sp. KCTC 12332: AXG53_10980
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Entry
AXG53_10980 CDS
T04408
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AXG53_10980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stek03400
]
AXG53_10980
Enzymes [BR:
stek01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AXG53_10980
DNA repair and recombination proteins [BR:
stek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AXG53_10980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
MAD
KxDL
Tuftelin_like
V-SNARE
DUF6687
T3SSipB
Motif
Other DBs
NCBI-ProteinID:
AMJ57105
LinkDB
All DBs
Position
2586705..2586965
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AA seq
86 aa
AA seq
DB search
MAKKSPNETSPVAHFEQSLEELEQLVEKMEAGDLSLEQSLTAYERGVGLYRQCQQALEQA
QLRVRLLTDPAQPEKSEPFESSGNED
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaagtcccccaatgaaacctcaccggtggcccacttcgagcaatcgcttgaa
gaactggaacagctggtcgagaagatggaagccggcgacctgagtctggaacagtcgctg
accgcatacgaacgtggcgttggcctgtatcgccagtgccagcaggcgctggaacaggcc
cagctgcgcgtgcgcctgctcaccgacccggcccagccggagaagtccgaaccctttgaa
agcagtggcaatgaagactga
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