Stenotrophomonas sp. KCTC 12332: AXG53_12625
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Entry
AXG53_12625 CDS
T04408
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek03030
DNA replication
stek03430
Mismatch repair
stek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXG53_12625
03430 Mismatch repair
AXG53_12625
03440 Homologous recombination
AXG53_12625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stek03032
]
AXG53_12625
03400 DNA repair and recombination proteins [BR:
stek03400
]
AXG53_12625
Enzymes [BR:
stek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXG53_12625
DNA replication proteins [BR:
stek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXG53_12625
DNA repair and recombination proteins [BR:
stek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXG53_12625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
AAA_18
AAA_2
AAA_30
AAA_7
AAA_19
PIF1
Mg_chelatase
nSTAND3
TsaE
AAA_assoc_2
AAA_24
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
AMJ57393
UniProt:
A0A126NKI5
LinkDB
All DBs
Position
complement(2971746..2973764)
Genome browser
AA seq
672 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCENGTSADPCGQCRACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGQY
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
EQIRGQMTRIMTAEQIEFDDSAIVQLARAADGSLRDGLSLLDQSIAYAGGALRDDVVRTM
LGTVDRTQVAAMLDALADGEGARLLQVVAGLAEFSPDWSGVLDALAEGLHRIQVQQLVPG
ASVPGEGIDGVAFAQRLRPEVVQLWYQMALGGRRDLHLAPSPRAGFEMAVLRMLAFRPAG
AVPAMPEGGAPGAGAGMGGSSQATPAAAGSQAQAAKPVEAQAVPAVAAPLQAAPVQPATE
PKPEPMPAAVPVAPPQAAPEPVVEVATVTSEPVQAQVAAQVPVQATKPVAADEDLPPWAV
EAAEANARDEAMAAEMAMPEPSSPAPEMPKPAPVAAAQPVQPAAPARPSGIAIEPAAPAS
GGRPLNDAEQWLDLVADSSLTGPSRELAANAAFVSFQQGVLRLALLPGFEYLQSERALNA
LAQALSQALGSTPKILIETGNVQAETLHERADRQRGERQSAAEAVFMADPQVQQLIQQGA
RVVADSIRPFKE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgtccttgcccgcaagtggcgtccgaagcgttttgccgagttggtgggc
caggaacacgtggtccgcgcgctcagcaatgcgctcgacagtggccgcgtccaccacgcc
tttctgttcaccggcacccggggtgtcggcaagaccaccattgcccgcatcttcgccaaa
tcgctgaactgcgagaacggcaccagcgctgacccctgcggtcagtgccgggcctgcctg
gatatcgatgccggccgctacatcgacctgctggaaatcgatgccgcgtccaataccggc
gtggatgacgtgcgcgaggtgatcgagaacgcccagtacatgccctcgcgcgggcagtac
aaggtctacctgatcgacgaagtgcacatgctctccaaggcggcgttcaatgcgctgctg
aagacgctggaagagccgccggaacacgtgaagttcctgctggccaccaccgatccgcag
aagctgccggtcaccgtgctcagccgctgcctgcagttcaacctgaagcggctggacgag
gagcagatccgtgggcagatgacccggatcatgaccgccgagcagatcgaattcgacgac
agcgccatcgtgcagctggcgcgggcggccgatggctcattgcgcgacggtttgtcgctg
ctggaccagtccatcgcctatgccggtggcgcgctgcgcgacgacgtggtgcgcaccatg
ctgggcacggtggaccgcacccaggttgcggcgatgcttgatgccctggccgatggcgaa
ggcgcgcgcctgctgcaggtggttgctgggctggcggagttctcgccggactggagtggt
gtgctggatgcgctggccgaaggcctgcatcgcatccaggtgcagcagctggtgccgggc
gcgtcggtgccgggcgaaggcatcgatggcgtggcctttgcacaacgcctgcgcccggaa
gtggtgcagctctggtatcagatggccctgggtggccgtcgcgatctgcatctggcgccg
agtccgcgtgcgggctttgaaatggccgtgctgcgcatgctggcgttccgcccggcgggc
gcggtaccggcaatgccggaaggtggcgcgccgggtgccggcgcaggtatgggcggcagc
agccaggccacgccggccgcggcgggttcacaagcgcaggcagccaagccagtcgaagcg
caggccgtaccggctgtagcagcgccgttgcaggcagcgcctgtgcagcctgcaacggaa
cccaaacccgaaccgatgcccgcagcggtgccagtcgcgccgccgcaagccgcgcctgaa
ccagtggtggaagtcgccacggtcacgtccgagcctgtgcaggcgcaggtagccgcacag
gtcccggttcaagccaccaagcccgtagccgccgacgaagatctgccgccatgggcggtc
gaggccgcggaagcgaatgcacgtgacgaggcgatggccgctgaaatggcgatgccggag
ccgtcgtcgccagcgccggaaatgcccaaacccgcgccggtagccgcagcgcaaccggtt
cagccggccgcgccggcacgtcccagtggtatcgccatcgaaccggcggcacccgcatcg
ggcggtcgcccgctcaacgatgccgagcagtggttggatctggtcgccgacagcagcttg
accggtccttcgcgcgaactggcagccaatgcggccttcgtcagtttccagcagggcgtg
ctgcggctggccttgttgccgggctttgagtacctgcagtctgagcgcgccttgaacgcc
ttggcgcaggccctgtcgcaggccttgggcagcacgcctaagatcctcattgaaaccggc
aacgtccaggccgaaaccttgcacgaacgcgctgatcgccagcgcggtgaacggcaatcc
gccgccgaagccgtgttcatggccgacccccaggtgcaacagctgatacagcagggtgca
cgggtcgtggccgattccatccgtcccttcaaagagtaa
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