Stenotrophomonas sp. KCTC 12332: AXG53_13275
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Entry
AXG53_13275 CDS
T04408
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stek03009
]
AXG53_13275
Enzymes [BR:
stek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AXG53_13275
Ribosome biogenesis [BR:
stek03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AXG53_13275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AMJ58766
LinkDB
All DBs
Position
complement(3098803..3099594)
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AA seq
263 aa
AA seq
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MLSRAPTTAARAAKPAPAAARHGLARVLSKAGVCSRTEAARRVLDGRVSVDGKVVRDPEF
PVVAGRQQVLLDGLPLAPPQRLYLALNKPRGLVTTVQDEQGRDTVYQCFEGAGLPWMAPV
GRLDKASEGLLFFSNDPEWAARLTEPSTGPLKTYRVQVDAVPDAALLERMHAGIEDEGEH
LAAHAVQLLRHGERTAWLEVVLDEGRNRHIRRLLKALGLDVLRLMRVAIGPVALGELGKG
QWRELSAAELNALQVASKNPQAT
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
ttgctttcgcgtgcgcccaccaccgctgcgcgcgctgccaagccggccccggccgcagcc
cggcacgggttggcgcgggtactgtccaaggcaggggtgtgttcgcgcaccgaggccgcg
cggcgcgtacttgatggtcgcgtcagtgtggatggcaaggtggtgcgcgacccggaattt
ccggtggttgccggtcgccagcaggtgttgctggacggcttgccactggcgccgccgcag
cgcctgtacctggctttgaacaagccgcgcggcctggtgaccacggtgcaggacgagcag
ggccgtgacaccgtctaccagtgttttgaaggcgccgggctgccgtggatggcaccggta
gggcggctggacaaggccagcgaaggcctgctgtttttcagcaatgacccggaatgggcg
gcacggctcaccgagcccagtaccggcccattgaagacctaccgggtgcaggtggacgcg
gtgccggatgcggcgctgctggaacgcatgcatgccggcattgaggatgaaggcgagcac
ctggccgcgcacgcggtgcagctgctgcgccacggcgagcgcaccgcctggttggaagtg
gtgctggacgaaggccgcaaccgccatatccggcgcctgctcaaggccttgggcctggat
gtgctgcggctgatgcgggtggcgattgggccggtggcgctgggcgaactgggcaagggc
cagtggcgcgaattgagcgcggccgagctgaatgcgctgcaggttgccagcaaaaatccg
caggctacttaa
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