Stenotrophomonas sp. KCTC 12332: AXG53_13400
Help
Entry
AXG53_13400 CDS
T04408
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXG53_13400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stek03021
]
AXG53_13400
03400 DNA repair and recombination proteins [BR:
stek03400
]
AXG53_13400
Enzymes [BR:
stek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXG53_13400
Transcription machinery [BR:
stek03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXG53_13400
DNA repair and recombination proteins [BR:
stek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXG53_13400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AMJ57515
UniProt:
A0A126NKX5
LinkDB
All DBs
Position
complement(3127753..3128751)
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTETRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTLEGLQEDVLDVLLNLKDVAIRMHTGDSATVSLSKQGPGVVTAADIKVDHN
VEVINGDHVICNLTKDTAINMRLKVERGFGYQPAAARRRPDEESRAIGRLVLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPANNGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVAAHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgcaaaccaggttctgcgtcctcgcggtccgcagatcgaacgccttacc
gagacccgcgccaaggtcgtgatcgaacccttggagcgtggttacgggcatacgctgggc
aacgccctgcgtcgcgtgctgctgtcgtccatcccgggcttcgccattaccgaagtcgag
atcgacggcgtgctgcacgagtacaccacccttgaaggcctgcaggaagacgtgcttgac
gtcctgctcaacctgaaagacgtggctatccgtatgcacaccggcgacagcgccaccgtt
tccctgtccaagcagggtccgggcgttgtcaccgctgccgacatcaaggttgaccacaac
gtcgaagtgatcaacggcgaccatgtgatctgcaacctgaccaaggacactgcgatcaac
atgcgtctgaaggtcgagcgcggcttcggctaccagccggccgctgcgcgtcgtcgtccg
gacgaagaatcgcgtgcgattggtcgtctggtgctggatgcctcgttctcgccggtccgc
cgcgtcgcttatgcggtggaagccgctcgcgtcgagcagcgtaccgacctggacaagctg
gtcatcgatatcgaaaccaacggcacgatcgatgccgaggaagctgtccgcactgcggcc
gacatcctcagcgatcagctgtcggtgttcggcgatttcacccaccgcgaccgcggtgcg
gccaagccggccaacaacggcgtggatccggtgctgctgcgcccgatcgacgacctggaa
ctgaccgtgcgttcggccaactgcctgaaggccgagagcatctactacatcggtgatctg
atccagaagaccgaagtggaactgctcaagaccccgaacctcggcaagaagtcgttgacc
gagatcaaggaagtgctggcccagcgtggcctgtcgcttggcatgaagctggagaactgg
ccgccggccggtgtcgccgctcacggcatgcttggttga
DBGET
integrated database retrieval system
