Stenotrophomonas sp. KCTC 12332: AXG53_17070
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Entry
AXG53_17070 CDS
T04408
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek03030
DNA replication
stek03410
Base excision repair
stek03420
Nucleotide excision repair
stek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXG53_17070
03410 Base excision repair
AXG53_17070
03420 Nucleotide excision repair
AXG53_17070
03440 Homologous recombination
AXG53_17070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stek03032
]
AXG53_17070
03400 DNA repair and recombination proteins [BR:
stek03400
]
AXG53_17070
Enzymes [BR:
stek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXG53_17070
DNA replication proteins [BR:
stek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AXG53_17070
DNA repair and recombination proteins [BR:
stek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AXG53_17070
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXG53_17070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AMJ58151
LinkDB
All DBs
Position
complement(3959819..3962587)
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AA seq
922 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNANGEPTGALFGVVNMLRSTLKEKPEYVAFVVDAPG
KTFRDDMYAEYKANRPPMPDELRSQVQPMCDIVQALGIDILRVEGVEADDVIGTLALAAA
ADGLEVTISTGDKDFAQLVRPGVVLVNTMTGSRTDSDAAVMDKFGVHAGQIVDYLALMGD
TVDNVPGVEKCGPKTAAKWLAEYNDLDGVIAAASTMKGKIGENLRAALPRLPLNRDLVTI
RTDVPLPQGPRDLQLREQDVEALRGLYARYGFTQALRELGGVAAPDVASDTTPSLRGTAA
GYAKAADNEPVVGLDPAMAVKGEYETVFTIEQLQAWVQRLQAADEFAFDTETDALDAMRA
NLVGISLAVEPGKGAYIPVGHTYPGAPAQLPMQQVLDALRPLLQDASKKKLGQHGKYDIH
VLRRHGVDVQGYADDTMLESFVLNSTATRHDMDSLAQRYLGYTTTKFEEVAGKGAKQISF
AQVGIDEAGAYAAEDADITLRLHRVLGPQLAAVPSLESVYRDIEMPLVPVLARIEANGVS
IDMAELKRQSSDLSARMLAAQQKATELAGHTFNLDSPKQLQAVLFDELGLPALVKTPKGQ
PSTNEEALEAIAEQHELPRVILEYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQSGAAT
GRLSSSDPNLQNIPIRTDDGRRIRQAFVAPPGRRLMACDYSQIELRIMAHLSEDPGLVRA
FEQGADVHRATAAEVFGRALEDVTPNERRAAKAINFGLMYGMSAFGLAKNLGIDRGQAQD
YVALYFSRYPAVRDFMERMRVQAREQGYVETLFGRRLYLNDIHARNQGLRAGAERAAINA
PMQGTAADIIKRAMVSVDGWLQGHSDKAKMILQVHDELVFEADADFIDTLRGEVEQRMAS
AASLRVPLVVDTGIGENWDQAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtccttattgacggttccagttacctgtaccgcgcgttccacgcgctc
ccgccactgaccaacgccaatggcgagcccaccggcgcgctgtttggcgtggtcaacatg
ctgcgttccacgctgaaggaaaagcccgagtacgtcgccttcgtggtcgatgcgccgggc
aagaccttccgtgacgacatgtacgccgagtacaaggccaaccgcccgcccatgcccgat
gagctgcgctcgcaggtacagccgatgtgcgacatcgtgcaggcgctgggcatcgacatc
ctgcgcgtggaaggagtggaagccgatgacgtgatcggcacgctggcgctggccgccgct
gccgacgggctggaagtgaccatttccaccggagacaaggatttcgcccagctggtgcgc
ccgggcgtggtgctggtcaataccatgaccggcagccgcaccgattcggacgcggcggtg
atggacaagttcggcgtgcacgccgggcagatcgtcgattacctggcgctgatgggcgac
accgtcgacaacgtgccgggcgtggagaagtgcggtcccaagaccgctgccaagtggctg
gccgaatacaacgacctggacggcgtgattgccgccgcatcgaccatgaagggcaagatc
ggcgagaacctgcgcgccgcgctgccgcggctgccgttgaaccgtgacctggtcaccatc
cgcaccgacgttccgctgccgcagggcccgcgtgacctgcagctgcgcgagcaggacgtg
gaagcgctgcgtggcctgtatgcacgttacggcttcacccaggccctgcgtgagctgggc
ggggtggccgcaccggatgtagccagcgacaccacgcccagcctgcgcggcaccgccgcc
ggctatgccaaggctgccgacaatgagccggttgttggcctcgacccggccatggcggta
aagggtgaatacgagacggtattcaccatcgagcaattgcaggcctgggtacagcggctg
caggccgccgacgagttcgccttcgataccgaaaccgatgcactggatgcgatgcgtgcc
aacctggttggtatcagcctggcggtggagccgggcaagggcgcctatattccggtcggc
cacacctacccgggcgcgccggcccagctgccgatgcagcaggtactggatgcgctgcgt
ccgctgttgcaggacgccagcaagaagaagctcggccagcatggcaagtacgacatccat
gtgctgcgccgccacggcgtcgacgtgcagggctatgccgacgacaccatgctggaaagc
ttcgtgctcaattccaccgctacccgccacgacatggattcgctggcgcagcgctacctg
ggctacaccaccaccaagttcgaggaagtggcgggcaagggcgcaaagcagatctccttc
gcccaggtcggcatcgacgaagccggtgcctatgcggccgaagacgccgacatcaccctg
cgcctgcaccgcgtgctgggcccgcagctggcggcggtgccttcgctggaaagcgtgtac
cgcgatatcgaaatgccgctggtgccggtactcgcacgcatcgaggccaatggcgtcagc
atcgacatggccgagctgaagcggcagagcagcgatttgtccgcgcgcatgctggccgca
cagcagaaggccaccgagctggcggggcataccttcaacctggactcgcccaagcagctg
caggcagtgctgttcgatgaactgggcttgccggcgctggtgaaaacccccaagggccag
cccagcaccaacgaagaagcgctggaagcgattgccgagcagcacgagctgccgcgcgtg
atcctggaataccgtggcctggccaagctgcgcagcacctataccgacaagctgccggag
atggtcaacccggataccggccgcgtgcacaccagctaccaccagtcgggtgcggcaacc
gggcggctgtcctcatccgatcccaacctgcagaacatcccgatccgcaccgacgatggc
cgccgcatccgccaggcgttcgtggcgccgccggggcgcaggctgatggcctgcgattac
tcgcagatcgagctgcgcatcatggcgcacctgtccgaggacccgggcctggtgcgcgcg
ttcgagcagggcgccgacgtgcaccgtgccaccgccgccgaagtgttcggccgcgcgctg
gaggacgtcacaccgaacgagcgccgtgccgccaaggcgatcaacttcggcctgatgtac
ggcatgagcgccttcggccttgccaagaacctgggcatcgaccgcggccaggcacaggat
tatgtagcgctgtatttcagccgctatccggcggtgcgtgatttcatggaaagaatgcgg
gtgcaggcgcgtgagcagggttatgtggaaaccctgtttggccgccgcctgtatctgaac
gatatccacgcccgcaaccagggcctgcgcgctggtgccgaacgcgccgcgatcaacgca
ccgatgcagggcaccgcagcggacatcatcaagcgtgcgatggtcagcgtggatggttgg
ctgcaggggcacagtgacaaggccaagatgatcctgcaggtgcacgatgaactggtgttc
gaggcggatgcggacttcatcgacacgttgcgtggtgaagtcgagcagcggatggcgtcg
gcggcgagcctgcgtgtgccgctcgtggttgacaccggaatcggggaaaactgggatcag
gcgcattga
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