Stenotrophomonas sp. KCTC 12332: AXG53_17085
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Entry
AXG53_17085 CDS
T04408
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek03420
Nucleotide excision repair
stek03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXG53_17085 (uvrD)
03430 Mismatch repair
AXG53_17085 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stek03400
]
AXG53_17085 (uvrD)
Enzymes [BR:
stek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXG53_17085 (uvrD)
DNA repair and recombination proteins [BR:
stek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXG53_17085 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AXG53_17085 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMJ58154
UniProt:
A0A126NMR4
LinkDB
All DBs
Position
complement(3963771..3965966)
Genome browser
AA seq
731 aa
AA seq
DB search
MDVSHLLDGLNAAQREAVSAPLGHHLILAGAGSGKTRVLIHRIAWLTEVCGVPAHGIFAV
TFTNKAAGEMRHRIDLQLSRGSRGMWIGTFHGLAHRLLRLHWADAKLPEAFQVMDSDDQL
RMIKRVVQQLELDDSKYPPKQVMWWINTQKDEGRRPQHIQPEPHDQWGETLRQAYAAYQE
RCDRAGLVDFAELLLRAHELLRDNPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGD
SAHVFVVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTIRLEQNYRSTANILGAANAVIAH
NPDRIGKELWTDSGDGDPIDLFAAYNEMDEARYLVERARQWVRDGGSYGDVAVLYRSNAQ
SRAFEEALLSEQVPYRVYGGMRFFERAEIKDALAYLRLMTNRNDDAAFERAVNTPTRGIG
ERTLDEVRRIARQQALPLWEAAMLATQGTDLTSRAKNALAGFINLVQQITAETGEMDLSE
RIDHVLSRSALREHWGKESRNALDSESRTDNLDELISVASRFVRREDDIEEGAEDMSELV
AFLSYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPLVFLAGMEEGLFPSARSLEESGRL
EEERRLAYVGITRARQKLVLGYAESRRIHGQDNYSLPSRFLREIPRELLNEVRPKVQVSR
PASLGANRVMGGHANIEAPPIKLGALVNHPKFGEGMVTDYEGNGQHARVQVEFADAGSKW
LVMAYANLTVI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcccacttgctcgacgggctgaacgcagcccagcgcgaggccgtttccgcg
cctcttggtcaccacctgatccttgccggcgccggttccggcaagacgcgtgtgcttatc
catcgcatcgcctggctcaccgaggtctgcggtgtgcctgcgcacggcatttttgctgtc
accttcaccaacaaggcggctggcgaaatgcgccaccgcatcgatctgcagctgagccgc
ggcagtcgtggcatgtggatcggtaccttccacggcctggcccaccgcctgctgcgcctg
cactgggccgatgccaagctgcccgaggccttccaggtgatggattcggacgaccagctg
cgcatgatcaagcgcgtggtgcagcagttggaactggacgacagcaagtacccgcccaaa
caggtgatgtggtggatcaacacgcagaaagatgaaggccgccgtccgcagcacatccag
cccgagccgcatgaccagtggggcgaaaccctgcgccaggcctacgcggcctaccaggag
cgctgcgaccgtgccggtctggtcgacttcgccgagctgctgctgcgcgcgcacgaactg
ctgcgcgacaacccggcgttgcttgcccattaccgcgcccgtttccgcgagatcctggtg
gacgagttccaagacaccaatgccatccagtacgccttcgtacgcgtgctggccggtgac
agcgcgcatgtgttcgtggtcggtgacgatgaccaagccatctatggctggcgcggtgcc
aaggtcgagaacgtgcagcgtttcctcaaggatttcccgggcgcgcagaccattcgtctg
gaacagaactaccgctccaccgccaatattctgggcgccgctaatgcggtgatcgcgcac
aacccggaccgcatcggcaaggagctgtggaccgacagcggtgacggcgacccgatcgat
ctgtttgctgcctacaacgaaatggacgaggcgcgttatctggttgaacgcgcgcggcag
tgggtgcgcgatggtggcagctacggcgatgtcgccgtgctctaccgcagcaacgcacag
tcgcgtgccttcgaagaagcactgctcagcgagcaggtgccgtatcgcgtgtatggcggc
atgcgcttcttcgagcgagctgaaatcaaggatgccctggcctatctgcggctgatgacc
aaccgcaacgacgatgcggctttcgagcgtgcggtgaatacgccgacgcgcggtatcggt
gagcgcacgctggacgaagtgcggcgtatcgcccggcagcaggcgctgccgctgtgggaa
gcggcgatgctggccacgcagggtacggatctgacctcgcgtgccaagaatgcgctggct
ggcttcatcaacctggtgcagcagatcaccgcagaaaccggtgagatggacctgtccgaa
cgcatcgatcacgtgctgtcgcgctcggccttgcgtgagcattggggcaaggaaagccgc
aacgcgctggattcggaatcgcgcaccgacaacctcgacgaattgatctcggtggcctcg
cgcttcgtgcgccgcgaagacgatatcgaagaaggtgccgaggacatgagcgagctggtc
gccttcctgtcctatgcctcgctggaagcgggcgaaggccaagcccaggccggcgaagag
ggcgtgcagttgatgacgctgcattcggccaagggcctggagtttccattggtgtttctg
gccggcatggaagaaggcttgttcccgagcgcgcgttcgctggaagaaagcggacggctg
gaagaggagcgccggttggcctatgtgggcatcacccgcgcgcgccagaaactggtgctg
ggctacgccgaatcgcgccgcatccatggccaggacaactacagcctgccgtcacgcttc
ctgcgcgagatcccgcgcgagctgctcaatgaagtgcgccccaaggtgcaggtctcgcgc
ccggcttcgctcggtgccaaccgggtgatgggcggccacgccaatatcgaggcgccgccg
atcaagctcggcgcgctggtcaatcacccgaagttcggcgaaggcatggtcaccgactac
gagggcaacggccagcacgcgcgcgtgcaggtcgagtttgccgacgccggcagcaagtgg
ctggtgatggcgtatgcgaatttgacggtgatttga
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