Stenotrophomonas sp. KCTC 12332: AXG53_18055
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Entry
AXG53_18055 CDS
T04408
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AXG53_18055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stek03400
]
AXG53_18055
Enzymes [BR:
stek01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AXG53_18055
DNA repair and recombination proteins [BR:
stek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AXG53_18055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_22
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AMJ58321
UniProt:
A0A126NSB1
LinkDB
All DBs
Position
4226700..4230326
Genome browser
AA seq
1208 aa
AA seq
DB search
MSTEALQSDPYLHLPLDGLRLIEASAGTGKTFTLATLFTRLVVEQGLRMGQILAVTFTDA
ATQELRKRIRERLELAARVVDSSPADDDSPETTLTRAILQRHLQQGSESAAQLGRRLRIA
AEETDLASIFTIHGFCTRVLGEYALESGHTFAAPELLANTRALHDELAADLWRLHAGQGE
HLEALLGLWKSPDALARDLPALAAELPLYPQPPQTLIEDTRPFRDGAAQRLAAGIEEHGE
SYLQQLRGALDGGILNKASYKADWIEPLFQQLLQWSRHPDPGAELDERLERLTLEALTAK
TNKAKAGSTPQSPLQPLIADYLQALAQVTQWQRQQSIVLLHQLRGEVRQRLAKLKQLRRQ
QTYDDLIDNVANALHGPHGAHLAERLRAQYRFALVDEFQDTDPRQWDIFRRIFAADDEAA
ALFLIGDPKQAIYGFRGGDVHTYLQAKALAEAAPALDRNFRSRPGVLRAIQALYDNAGPE
AFLDERIQFEPVLPGSKRSDADYLFDGKPAPALTLQLIAADADGKPLKADASRDAATAAC
VADIHRVLSAAREGRALVDGKPVQPGDIAVLVRSHKEASRVQQALAALGIPAVAAGKQSL
FASAEAHELRLLLLALLQPADEGRLRAALATVLLGESAARIAAMEYEGEQQRLHQERLLQ
WRERWQRGGVLALLSDLCAEQAERLLLLIDGERRLTNYLQLAETLQEASNRSIGLHGLLD
WLQTQIAHADEGDEAQLLRLESDARRVQIITLHKSKGLEYPLVYLPFVGIATNAPDSSNH
RTVHDGEQRVLHWKIDKEDPDWKVIGQQVNADEEAETARLLYVGLTRAEHALWISGGALT
GLASSRLGPMLQGLPAHADIQVIEHDGGPAPTRLPPEREQALPPVREVRRSVPHDWWVYS
FTQLAHAEGGHDTAAASTEDSGGAADEPAQVDVDAEPASEASAAQPEVFDPRFAGSRFGN
VLHAALENVDFGAWRDWQPGDVAPEGQGEIIEKAMRADGYIDEEIADGVALLTQLIGQTL
TVTLPEGGALHSLDEGERRAEIEFHFAMQPTTVPALLRVLHAHGVVRGRHGFGLRRQLEG
LMTGKIDLTYVRDGRWYVLDYKSNRLPDYALAQLDAAMRHSEYDLQALIYTVALHRWLRF
RIGAGYDYARDFGGIRYLFCRGLDATRTPSPGLYAHNFAAELVHAVDELFAGGRDGHAAL
LARLGGEA
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgaagcgctgcaatccgatccctatctgcacctgccgctggatggcctgcgc
ctgatcgaggccagcgccggcaccggcaagaccttcactctggccacgctgttcacccgc
ctggtggtggagcagggcctgcgcatgggccagatcctggcggtgacctttaccgatgcc
gccacccaggagctgcgcaaacgcatccgcgagcggctggaactggccgcgcgcgtggtc
gacagcagtcccgcagatgacgacagcccggaaacaacgctcacccgcgccatcctgcaa
cgccatctgcagcagggcagcgaaagtgctgcgcagctgggccggcgcctgcgcattgcc
gccgaagaaaccgacctggcctcgatcttcaccatccacggcttctgcacgcgggtgctg
ggcgaatacgcgctggagagcggccacacctttgccgcgcccgagctgctggccaatacc
cgcgcgctgcatgacgagttggcggccgacctgtggcgcttgcatgcagggcagggcgag
catctggaggccttgctgggcctgtggaaaagtcccgatgccctggcccgcgatctgccc
gcgttggccgccgagctgccgctttatccacagccaccgcagaccctgatcgaagacacg
cgccccttccgcgacggcgccgcgcagcgtcttgccgccggcattgaagaacatggcgag
agctacctgcagcaactgcgtggcgcgcttgatggcggcatcctcaacaaggccagctac
aaagccgactggatcgagccgctgttccagcaactgctgcagtggagccgccatccggat
ccgggcgccgagctggatgagcggctggagcggctgacgctggaggcactcaccgccaag
accaacaaggccaaggccggcagcaccccgcaatcaccgttgcagccactgattgccgac
tacctgcaggcactggcgcaggtcacgcagtggcagcgccagcaatcgatcgtgctgctg
caccagctgcgcggcgaggttcgccagcgcctggccaagctcaagcagctgcgccgccag
cagacctatgacgatttgatcgacaacgtcgccaatgccctgcacggcccgcatggcgcg
catctggccgaacgcctgcgcgcgcagtaccgctttgcgctggttgatgaattccaggac
accgacccgcgccaatgggacatcttccgccgcatcttcgccgcggacgacgaggccgcc
gcgctgttcctgatcggcgaccccaagcaggccatctacggcttccgtggcggcgacgtg
catacctatctgcaggccaaggcgctggccgaggcggcgccggcgctggaccgcaacttc
cgctcgcgccccggcgtgctgcgcgcgatccaagcgctgtacgacaacgccggccccgag
gccttccttgacgaacgcatccagttcgagcccgtcctgccgggcagcaagcgcagcgac
gccgactatctgttcgacggcaaacccgcccctgcgctgaccctgcagctgatcgccgct
gatgccgatggcaaacctttgaaggccgatgcctcgcgcgatgccgccactgcagcttgc
gtggcagatatccacagggtgctcagcgccgcccgcgaaggccgcgcgctggtcgatggc
aaaccggtgcagccgggcgatatcgccgtgctggtgcgttcgcacaaggaagcctcgcgc
gtgcagcaggccttggccgcactgggcattcccgcagtagccgccggcaagcagagcctg
tttgccagcgccgaagcccacgaactgcgcctgctgttgttggccctgctgcaaccggcc
gacgaaggccgcctgcgcgccgcgttggccaccgtgctgctgggcgagagtgccgcccgc
atcgccgcgatggaatacgaaggcgaacaacagcgcctgcaccaggagcgcctgctgcaa
tggcgcgagcgctggcagcgcggcggcgtgctggccctgctgtcggacctgtgcgccgaa
caggccgagcgcctgttgctgctgatcgacggcgagcgccgcctgaccaactacctgcag
ctggccgaaaccctgcaggaagccagcaaccgcagcatcggcctgcacggcctgctggac
tggctgcagacccagatcgcccacgccgacgaaggtgacgaagcgcagctgctgcgactg
gaatcggacgcgcgccgtgtgcagatcatcaccctgcacaagagcaagggcctggaatac
ccgctggtctacctgcccttcgtcggcatcgccaccaatgcgccggacagcagcaaccac
cgcaccgtgcacgatggcgaacaacgcgtgctgcactggaagatcgacaaggaagacccg
gactggaaggtcatcggccaacaggtcaacgccgatgaagaagccgaaaccgcgcgcctg
ctctacgtcggcctgacccgcgccgagcatgccttgtggataagtggtggcgcattgacc
gggctggccagctcgcggctggggccgatgctgcagggcttgccggcgcatgccgacatc
caggtgatagaacacgacggcggcccggcgccgacgcgcttgccgcccgagcgcgaacag
gccttgccgccggtacgcgaggttcgccgcagcgtgccgcacgactggtgggtgtacagc
ttcacccagctggcccatgccgaaggcggccacgacaccgccgccgcctctaccgaagac
agcggcggtgccgccgacgaaccggcgcaggtcgatgtggatgccgaaccggccagcgag
gccagcgccgcacagccggaagtatttgatccgcgttttgccggcagccgcttcggcaac
gtgctgcatgccgcgctggaaaacgtcgacttcggcgcctggcgtgactggcagcccggc
gatgtggcaccggaagggcagggcgagatcatcgagaaagccatgcgtgccgatggctac
atcgacgaggagatcgccgacggcgtggcgctgctgacccaactgatcggccagaccctg
accgtgaccctgcccgaaggcggcgccctgcattcactggatgaaggtgagcgccgcgcc
gaaatagagttccacttcgccatgcagccgaccacggtgccggcactgctacgcgtgctg
cacgcacacggtgttgtgcgcggccgccatggctttggcctgcgccgccagctggaaggg
ctgatgacaggcaagatcgaccttacctacgtccgcgacgggcgttggtatgtgctcgac
tacaaatccaaccgcctgcccgattacgccctggcgcaactggacgcggccatgcggcat
agcgaatacgacctgcaggcgctgatctacaccgtggccctgcatcgttggttgcgcttc
cgcatcggtgctggttacgactatgcacgtgacttcggcggcatccgttatctgttctgc
cgcggcctggatgcaacacgcacgccatcgccgggcctgtacgcgcacaacttcgccgcg
gaactggtgcacgccgtggatgaattgtttgccggtggccgcgatggccatgcggccttg
ttggcacgactgggaggcgaggcatga
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