Stenotrophomonas sp. KCTC 12332: AXG53_18060
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Entry
AXG53_18060 CDS
T04408
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AXG53_18060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stek03400
]
AXG53_18060
Enzymes [BR:
stek01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AXG53_18060
DNA repair and recombination proteins [BR:
stek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AXG53_18060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
RecD_N
Helicase_RecD
UvrD-helicase
AAA_22
nSTAND3
DEAD
Mg_chelatase
UvrD_C
SLFN-g3_helicase
T2SSE
Herpes_Helicase
SH3_13
AAA_29
AAA_25
AAA_28
FtsK_SpoIIIE
TrwB_AAD_bind
Rad17
B12-binding_2
AAA_24
NACHT
Phageshock_PspD
ATPase
MeaB
AAA_16
SRP54
NPHP3_N
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AMJ58322
UniProt:
A0A126NRX1
LinkDB
All DBs
Position
4230323..4232257
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AA seq
644 aa
AA seq
DB search
MSLLAALNKAGALRALDHALAQSLRRLDPETPDAVLAAAALASLAVSQGHAGFDPTQPQR
LVDAGVEWPAAEQWIVQLAASKWIASAVDNNAASEQAPLVWENGLLYLRRYREYERRLAT
GLQRIGQAPVVGGDVAGLAQVFARLFPGQAAPQDSQTSAQLDLFLLPQAGEGAQRADEGK
PLDHQARAAATALRHNLLLITGGPGTGKTTTITRLLVLLAAQAQAANQPAPRVALAAPTG
RAAERMAESLRHALQKLPAAGIDSALCEQLPSTGTTLHRLLGVIPDSPRFRHHADNPLPY
DVIVVDEASMIDLPLMTKLVEAIAPGTRLVLLGDPDQLPSVEAGDVLSAILRAAGDGQRS
NAADAQALRALLGELPGEAIETKPSDFVGARVQLQRGYRQSEALQLAPLANAMRDGDAEQ
ALALLREAQLAGVHFHEGDVDPLQAWREPLQQYWQSLADAASPADALALAGRMRLLTAVR
EGPQGARGLNARIEDLLAGNRGRALGPGWFNGRLLIIGENSYRHRLFNGDVGICLRDGSG
ITAWFPGDDPANPRAFHPAALPLHESAFAMTVHKAQGSEFDQVWLQLPRRDNRVLSRELL
YTGITRARNGLHLAGSAEVIEAALARHASRWSGLAQRLAPALLQ
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctggccgcattgaacaaagccggtgccttgcgcgcgctggatcatgccctg
gcgcagagcctgcgccgcctggacccggaaacgccggatgcggtgctggcggcagcagcc
ttggcgtcgctggcggtatcgcagggccacgccggctttgatccgacccagccgcagcgg
ctggtagacgccggtgtggaatggccggcggccgagcagtggattgtacagctggcggca
tcgaagtggatagccagtgctgtggataacaacgcggcgtcggaacaggcgccgctggtc
tgggaaaacggcttgctgtacctgcgccgctatcgtgagtacgagcgccgcttggcaacg
ggcttgcagcggatcgggcaggcaccggttgttggcggcgatgttgccggcttggcgcag
gtgtttgcgcgcttgtttccggggcaggcggctccgcaagactcacagacctcagcgcag
ctggatctcttccttctcccgcaagcgggagaaggtgcccaaagggcggatgaaggcaag
cctttggatcaccaagcaagagccgcagccaccgccctgcgccacaacctgctgctgatc
accggcggccccggcaccggcaagaccaccaccatcacccgcctgctggtgctgctggcc
gcacaggcgcaggcggcaaaccagccggccccgcgcgtcgccctggccgcacccaccggc
cgcgctgccgaacgcatggctgaaagcctgcgccacgccctgcagaagctgccggccgcc
ggtatcgacagcgccctgtgtgaacaactgccgagcaccggtactactttgcaccgcctg
ctcggcgtgatcccggattccccgcgcttccgtcaccacgccgacaacccactgccctac
gatgtcatcgtggtcgacgaagcctcgatgatcgatctgccgctgatgacaaaactggtc
gaagcaatcgcaccgggcacccgcctggtgctgcttggcgatcccgaccagttgccgtcg
gtggaagccggcgacgtactcagcgccatcctgcgtgccgccggtgatggccagcgcagc
aatgccgcagatgcccaagccctgcgtgcattgctgggcgaactgccgggcgaggcgata
gaaaccaagccttccgacttcgtcggtgcccgcgtgcaactgcagcgcggctaccgccag
agcgaagccctgcagctggcgccactggccaatgccatgcgcgacggcgacgcggagcag
gcattggccttgctgcgcgaggcgcaactggccggcgtgcatttccacgaaggcgatgtc
gatccactgcaggcctggcgcgagccgctgcagcagtactggcagtcactggccgatgcc
gccagcccggccgatgccttggccctggccggccgcatgcgcctgctcaccgcggtgcgc
gaaggcccgcagggcgcgcgcgggctcaacgcccgcatcgaagacctgctggctggcaac
cgcggccgcgcgctgggcccgggctggttcaacggccggctgctgatcattggcgagaac
agctaccgccaccgtctgttcaatggcgatgtcggcatctgcctgcgtgacgggagtggc
atcaccgcctggttccccggcgacgacccggccaacccgcgcgccttccacccggcggca
ttgccgctgcacgagagcgccttcgcgatgaccgtgcacaaggcgcagggctcggagttc
gaccaggtctggctgcagctgccacgccgcgacaaccgcgtgctcagtcgcgagctgctg
tacaccggcatcacccgcgcacgaaatggcttgcatctggccggtagcgccgaggttatc
gaagcggcgctggcccgccatgccagccgctggtcgggcttggcgcagcgcttggcgccc
gctcttttgcagtag
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