Stenotrophomonas sp. KCTC 12332: AXG53_18680
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Entry
AXG53_18680 CDS
T04408
Name
(GenBank) DNA-binding protein
KO
K10979
DNA end-binding protein Ku
Organism
stek
Stenotrophomonas sp. KCTC 12332
Pathway
stek03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AXG53_18680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stek03400
]
AXG53_18680
DNA repair and recombination proteins [BR:
stek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AXG53_18680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AMJ58884
LinkDB
All DBs
Position
4385627..4386553
Genome browser
AA seq
308 aa
AA seq
DB search
MARPIWSGTLSFGLLNVPVSLMSGERKVDISFRMLDSRDKKPIRFERVNAETGEEVPWKD
IIKAFEYDKGSYVVVEKEDIASAAPQTHESIDVEAFVDRDAIGLRFYEKPYVLVPGKKAE
KGYVLLRETLKKTGKVGVARVVIRTREYLCAVAAEGDALVLLMLRYPQELVDPSEYKLPS
GKASDYRISSRETEMAASLIESMATPWQPESYEDEFRKRLQAIIRKRLKAKGATTRIIDE
QAPEPEDATTNVVDFMSLLQKSLDENKRTPARKRAPAKKAKAAKVAKKASKAATAGKPAK
TARKAAAR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcccatctggagtggcaccctttccttcggcctgctgaacgtgccggtatcg
ctgatgagcggcgaacgcaaggtggacatcagcttccgcatgctcgactcgcgcgacaag
aagccgatccgcttcgagcgggtcaatgccgagaccggcgaagaggtgccgtggaaggac
atcatcaaggccttcgagtacgacaagggcagctatgtggtggtggagaaggaggacatc
gcctcggccgcaccgcagacccacgagtccatcgacgtcgaggcattcgttgatcgcgat
gccatcggcctgcgcttctatgagaaaccctatgtgctggtgccgggcaagaaggccgaa
aaaggctatgtgctgctgcgcgagacgttgaagaaaaccggcaaggtgggggtggcgcgg
gttgtcatccgcacccgcgaatacctgtgcgctgttgccgccgaaggcgacgcgctggta
ttgctgatgctgcgctacccgcaggaactggtggacccttccgaatacaagctgcccagc
ggcaaggcttccgattaccgcatcagcagccgcgaaaccgagatggcggccagcctgatc
gaatccatggccacgccgtggcagccggaaagctatgaagacgagttccgcaaacggctg
caggcgatcatccgcaagcgcctgaaagccaagggcgccaccacccgcatcatcgacgag
caggcgcccgagccggaggatgccaccaccaatgtggtcgacttcatgtcgctgctgcag
aagagtctggacgagaacaaacgtacccccgcgcgcaaacgtgcaccggcaaagaaagcc
aaggcagccaaggtagccaagaaggccagcaaggcggcaactgccggcaagcccgcaaaa
accgcgcgcaaggcggctgcgcgctag
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