Stenotrophomonas sp. KCTC 12332: AXG53_19030
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Entry
AXG53_19030 CDS
T04408
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
stek
Stenotrophomonas sp. KCTC 12332
Brite
KEGG Orthology (KO) [BR:
stek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stek03009
]
AXG53_19030
Enzymes [BR:
stek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
AXG53_19030
Ribosome biogenesis [BR:
stek03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AXG53_19030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
DUF7433
Motif
Other DBs
NCBI-ProteinID:
AMJ58891
LinkDB
All DBs
Position
4462272..4462811
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AA seq
179 aa
AA seq
DB search
MLIAFNKPFNVLCQFTDRSQPPRATLAGFGLPANVYAAGRLDYDSEGLLLLTDDGTLAHH
LTDPRHKQAKTYWVQVEGVPSEDKLQALRDGVQLNDGPTLPARVELLPAAPKIWERTPPV
RFRKTVPDSWLAITLREGRNRQVRRMTAAVGLPTLRLVRAVMGPYALGDLQPGQWRQLD
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgccttcaacaaacccttcaacgtgctgtgccagttcaccgaccgcagccag
ccgccgcgcgccaccctggccggcttcggtctgcccgccaatgtgtatgcggcgggccgt
ctggattacgacagcgaaggcctgctgctgctcaccgacgatggcacgctcgcccatcac
ttgaccgacccgcgccacaagcaagccaagacctattgggtgcaggtggaaggcgtgccg
agcgaagacaagctgcaggcgctgcgtgatggcgtgcagctcaatgacggcccaaccctg
cctgcccgcgttgaactgctgccggccgcgccgaagatctgggagcgcacgccgccggta
cgcttccgcaagaccgtaccggacagctggctggctataaccttgcgcgaaggtcgcaac
cgccaggtgcggcgcatgaccgctgccgtaggtttgccgacgttgcggctggtgcgggca
gtgatgggaccgtacgcactgggcgaccttcagcctgggcagtggcgccagctggattga
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integrated database retrieval system
