Stella sp. ATCC 35155: STAQ_03600
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Entry
STAQ_03600 CDS
T07954
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stel
Stella sp. ATCC 35155
Brite
KEGG Orthology (KO) [BR:
stel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stel03016
]
STAQ_03600 (truB)
Enzymes [BR:
stel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
STAQ_03600 (truB)
Transfer RNA biogenesis [BR:
stel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STAQ_03600 (truB)
Prokaryotic type
STAQ_03600 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Tailspike_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBK35282
LinkDB
All DBs
Position
386266..387243
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AA seq
325 aa
AA seq
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MGRAERRAIHGWIVLDKPLGLTSTAAVARVRRLTGAAKAGHGGTLDPLATGVLPVALGEA
TKTVGFAMTGAKTYRLRIAWGEERSTDDREGAVTASSPVRPSPDAIAAMLPRFVGDILQV
PPAFSAIKVAGRRSYDLARAHSAGRGAAPPDLPARPARIDAIRPLDPGASEDEAEFEVDC
GKGVYMRSLARDLARALGTCGHVAALRRTRVGPFDLSQAVRLEPETGDSEIPLDNMGDLC
DKPALIAHLLPVVTALDDIPALALTEAEAERLRHGGTVSPAAADLVRRLAALGEGTVVSA
LQGDRLVALAEVRDGSIRPMRVMNL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgctgagcggcgggcgatccatggctggatcgtcctcgacaagccgctgggg
ctgacctcgaccgccgccgtcgcccgcgtccgccgattgacgggcgccgccaaggccggc
catggcggaacgctcgatccgctcgccaccggcgttctgccggtggcgctgggcgaggcg
accaagacggtcggcttcgccatgacgggcgccaagacctaccggctgcggatcgcctgg
ggcgaggagcgatcgaccgacgaccgcgagggcgcggtcacggcatcgagcccggtgcgg
ccgtctcccgacgcgatcgcggccatgctgccgcgcttcgtcggcgatatcctgcaggtg
ccgccggcattctcggcgatcaaggtcgccggccggcgctcctacgacctcgcccgtgcc
cattcggccggccgtggcgcggcgccgcccgatctccccgcgcgtcccgcgcgcatcgac
gccatccggccgctcgaccccggcgcttcggaggacgaggcggagttcgaggtcgattgc
ggcaagggcgtctatatgcgcagcctcgcgcgcgacctcgcccgggcgctcggcacctgc
ggccacgtcgccgccctccgccgcacccgcgtcggcccgttcgatctgtcgcaggcggtc
cggctggagccggagacgggcgactccgagattccgctagataacatgggcgatctctgc
gataagcccgcgcttatcgcgcatctgcttcccgtcgtgaccgcgctggacgacatcccg
gccctggccttgacggaagcggaagcggagcgtctgcgacacggaggtaccgtgtcgccg
gcagctgcggacctggtccgccggcttgccgcgctcggcgaaggcacggtcgtatccgcc
ctccagggcgatcggctggttgccctggccgaggtccgggacggctccatccggccgatg
cgcgtgatgaacctctag
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