Stella sp. ATCC 35155: STAQ_17090
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Entry
STAQ_17090 CDS
T07954
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
stel
Stella sp. ATCC 35155
Brite
KEGG Orthology (KO) [BR:
stel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stel03016
]
STAQ_17090 (rnd)
Enzymes [BR:
stel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
STAQ_17090 (rnd)
Transfer RNA biogenesis [BR:
stel03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
STAQ_17090 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BBK36631
LinkDB
All DBs
Position
complement(1831605..1832765)
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AA seq
386 aa
AA seq
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MTLIADTDALTAFCQRQAGANFLAVDTEFMRDKTYWPQLCLVQVAGPEEAAAIDPLAPGM
DLAPLLDLMFDERIVKVFHAARQDVEIFYHLTGRIPEPLFDTQVAAMVCGFGEAVSYENL
ASKLAGARIDKSSRFTDWAQRPLTQRQLTYALSDVTHLRPTYEKLRRRLERSGRGEWLND
EMNVLLEPSTYRLDPVEAWRRFKIRGGSGRFLAVLQEVAAWRERAAQDKDMPRGRILRDE
AILEIAAHHPTSVDELARTRGLGKGLAEGRFGTEILEAVQRGLALPEAELPKPPPRQDMP
PGLGPLCDLLRVLLKMKCEEHDVAQKLVASADDLERIAASDDADVPALQGWRREVFGQHA
LALKHGRLGLTAHGKAIAVVSLVDAA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgatcgccgacaccgacgccctgaccgccttctgccagcgccaggccggcgcg
aacttcctcgcggtcgataccgaattcatgcgcgacaagacctactggccgcagctctgc
ctcgtccaggtcgccggtcccgaggaggcggcggcgatcgatccgctcgcccccgggatg
gatctcgcgcccttgctcgatctcatgttcgacgaacggatcgtcaaggtcttccatgcc
gcccgccaggacgtcgagatcttctatcacctgaccggccgcatcccggagccgctgttc
gacacccaggtcgcggccatggtctgcggcttcggcgaggcggtctcctacgagaacctc
gcgagcaagctggccggcgcgcgcatcgacaagtcgtcccgcttcaccgactgggcgcag
cggccgctgacccaacgccagctgacctacgcgctgtccgacgtgacccatctgcgtccg
acctacgagaagctgcgccggcgactggaacggtcgggccgcggcgagtggctgaacgac
gagatgaacgtcctgctggaaccctcgacctatcgcctcgatccagtcgaggcgtggcga
cggttcaagatccggggcgggtccggccggttcctggccgtcctccaggaggtcgcggcc
tggcgcgagcgcgccgcccaggacaaggacatgccgcgcgggcgcatcctgcgcgacgag
gcgatcctggaaatcgccgcgcaccacccgacctcggtcgacgaactggcccgcacacgc
ggcctcggcaagggcttggcggaggggcgcttcgggaccgagatcctggaggcggtgcag
cgcgggctggcgctgccggaggcggagttgcccaagccgccgccgcggcaggacatgccg
cccggcctggggccgctctgcgacctgctgcgcgtgctgctcaagatgaagtgcgaggag
cacgacgtcgcccagaagctggtcgcctcggccgacgacctggagcgtatcgccgcgtcc
gacgacgccgacgtgccggcgctgcaaggctggcggcgcgaggtgttcggccagcacgcg
ctggccctcaagcacggccggctcggcctcaccgcgcacggcaaggcgatcgcggtggtc
agcctggtcgacgcagcctga
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