Stella sp. ATCC 35155: STAQ_17250
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Entry
STAQ_17250 CDS
T07954
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
stel
Stella sp. ATCC 35155
Pathway
stel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STAQ_17250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stel03019
]
STAQ_17250
03009 Ribosome biogenesis [BR:
stel03009
]
STAQ_17250
Enzymes [BR:
stel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STAQ_17250
Messenger RNA biogenesis [BR:
stel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STAQ_17250
Ribosome biogenesis [BR:
stel03009
]
Prokaryotic type
rRNA helicases
STAQ_17250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
BBK36647
LinkDB
All DBs
Position
1850333..1852096
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AA seq
587 aa
AA seq
DB search
MSAPLAQALAARDYAEPTPVQAAVLEAEAHERDLLVSAQTGSGKTVAYGLAFASTLLGDA
ERLPRAGQPLALVVAPTRELALQVHRELTWLYAQTGAVVAACVGGMDPGAERRRLQAGAH
IVVGTPGRLRDHLERGVLVFDALAAVVLDEADEMLDLGFREDLEFLLDATPPERRTLLFS
ATLPPDIVKLAVRYQRNAHRIAVVGAERGHADIEYRCVRVHPRAIELAVVNVLRFIEAPS
AIVFCNTREAVRHLLAILLERGFAAVALSGELSQNERNHALQALRDGRARVCVATDVAAR
GIDLPNLGLVVHAELPHDPEVLQHRSGRTGRAGRKGVSILMVPANRRRRAELLLSAARVG
ASWSGPPTADDIRGLDRERMLADPLLSEPVGEEDLALAQALLADRSPEAVAAALVRVWRS
QRPAPEEVYDPGVDRGPRERTVTAAPDRAYDRAQDRAPGGGKPRLAGRGVWFRLNVGRQK
NADPRWLLPMICRQGMITKAEIGAIRIFDRETRFEVAEQAVDGFMTAIRRLERGEVRIEQ
MPLDGHRHDVHRPDGHSRDGHIEGAVRRTPPRQNRTDQRPPRTGRAA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcccctcgcgcaggcgctcgccgcgcgcgactatgccgagcccacccccgtc
caggccgccgtcctcgaagccgaggcgcatgagcgcgacctgctggtgtccgcccagacc
gggtcgggcaagaccgtggcctatggcctggcgttcgcctccacgctgctgggcgacgcc
gagcggctgccgcgtgccggccagccgctggcgctcgtcgtcgccccgacccgcgagctg
gccctgcaggtccaccgcgagctgacctggctctatgcccagaccggcgcggtcgtcgcc
gcctgcgtcggcggcatggatccaggcgccgaacggcgccgccttcaggccggtgcccat
atcgtcgtcggcacgccgggacgcctgcgcgaccatctcgagcgcggcgtgctggtgttc
gacgcgctggcggccgtcgtcctcgacgaggccgacgagatgctcgatctcggctttcgc
gaagacctggaattcctgctcgacgcgaccccgccggagcgccggacgctgctgttctcg
gcgacgctgccgccggacatcgtcaagctcgcggtgcgctatcagcgcaatgcccaccgg
atcgccgtggtcggcgccgaacgcggccatgccgacatcgagtatcgctgcgtgcgggtg
catccgcgcgccatcgaactcgccgtcgtcaacgtgctgcgcttcatcgaggcgccgagc
gccatcgtcttctgcaacacgcgggaggcggtgcgccatctgctggcgatcctgctcgag
cgcggcttcgccgccgtcgccctgtcgggcgaactcagccagaacgagcgcaaccatgcg
ctgcaggcgctgcgggacgggcgcgcccgggtctgcgtggcgaccgatgtcgcggcgcgc
ggcatcgacctgcccaatctcggccttgtcgtccatgccgagctgccgcacgaccccgaa
gtcctgcagcatcgcagcggccgtaccggccgggcggggcgcaagggcgtcagcatcctg
atggtgccggcgaaccggcgacgccgggccgagttgctgctttccgcggcccgggtcggc
gccagctggagcggtccgccgacggccgacgatatccgcggcctcgaccgcgaacgcatg
ctggcggacccgctgctgagcgagcccgtgggcgaggaggatctcgcgctggcgcaggca
ttgctggccgaccgttcgccggaggccgtggccgcggcgctggtgcgggtctggcgctcg
cagcggccggcgcccgaggaagtctatgatcccggcgtcgaccgcggcccgcgcgagcgg
accgtgaccgcggcgccggatcgcgcatatgaccgcgcacaggatcgcgcgcccggcggg
ggcaagccgcggctggccgggcgcggcgtctggttccgcctcaatgtcgggcggcagaag
aacgccgatccgcgctggctgctgcccatgatctgccgccagggcatgatcaccaaggcc
gagatcggcgccatccgcatcttcgaccgcgagacgcgcttcgaggtcgccgagcaggcc
gtcgacggcttcatgacggccatccggcgcctggagcgcggcgaggtgcgcatcgagcag
atgccgctggatgggcaccgtcatgacgtgcacaggccggatgggcacagccgtgacggg
cacatcgagggcgcagtccgccgcactccgccgcgccagaaccggaccgatcagcgcccg
ccgcggaccggccgggcagcctga
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