Stella sp. ATCC 35155: STAQ_24220
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Entry
STAQ_24220 CDS
T07954
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
stel
Stella sp. ATCC 35155
Pathway
stel03030
DNA replication
stel03430
Mismatch repair
stel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STAQ_24220
03430 Mismatch repair
STAQ_24220
03440 Homologous recombination
STAQ_24220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stel03032
]
STAQ_24220
03400 DNA repair and recombination proteins [BR:
stel03400
]
STAQ_24220
Enzymes [BR:
stel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STAQ_24220
DNA replication proteins [BR:
stel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STAQ_24220
DNA repair and recombination proteins [BR:
stel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STAQ_24220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BBK37344
LinkDB
All DBs
Position
complement(2577370..2580813)
Genome browser
AA seq
1147 aa
AA seq
DB search
MSHADFVHLRVHSAYSLSEGALKTKDLVKLCVKSAMPAVAVTDTGNLFGALEFASEAAAS
GVQPIVGCVFGVTRVAGRPSVNGLAPPPDRMVMLVQDETGYANLLRLVSRAFMESDGTRE
AQLSLSDLAGATDGLLAFVGATDSPVGRLLVEGQRDTARQCLDDLRALFPDRLYIELQRH
GLAAEEAIEPELLALADATGLPLVATNDAYFADRSMYEAHDALICIAEGVTVSIEQRRRL
TPEHGFKSAQEMRELFADIPEAIDNTLVVARRCAYMPEKRKPILPPFATESGRGEPEELH
AQAHQGLDARLAQMAEQPEPGPYRERLDFELDVIVRMGFAGYFLIVADFIQWAKRQGIPV
GPGRGSGAGSVVAWALSITDLDPLRHGLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYV
QGRYGRDRVAQIITFGKLQARAVLRDVGRVLEMPYGQVDRICKLVPNNPANPVTLRQAID
GEPLLQSMRDEDEQVARLIGIALQLEGLYRHASTHAAGVVIGDRPLDELVPLYRDPRSDM
PVTQFNMKYVETAGLVKFDFLGLKTLTVLAKAEELLRRRGVTIDLANLPLDDGPTFEMLG
RADATGVFQLESQGMRDVLRKLRPDRFEDIVAVVALYRPGPMENIPRYIACKHGEEKPDY
LHPSIEPILKETFGIMIYQEQVMQIARTLSGYSLGGADLLRRAMGKKIKEEMDAQRQAFV
DGAVANGVEKATAGHVFDQVAKFAGYGFNKSHAAAYALVAYQTAYLKANYPVEFFAASMS
LDLGNTDKLATFRQELSRLGIPLLPPDVNGSQVEFSVETRLDGVGCVRYALAGLKGVGIP
AMQAMVASRADRPFAGLEDFAARIDSRAVTRKQVEVLARAGAFDGFGIGRARVMAAAELV
VREAAAAAADRDSRQETLFGGSGAPKWRLPDVPDWNLFDKLQNEFEAIGFYLSNHPLDAY
GKSLDRIGVIRSADLPARLAMGGSTRVKLAGIVVGKRERTSARGNRFAFVQMSDASGLYE
IAVFSEVLSVARDLLDSGQPLLVTADARAEGETIRLGAAQIEALDKATSSAQAGMRIHLG
GDSALESLRRLIEKEASGRGGRGRISLVLGVDRVQEVEVALPGFYRVTPQVRAAVKSLVG
VVDVQDI
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgccgatttcgtccatctccgcgtccattccgcctactcgctgtccgagggg
gcgctgaagacgaaggacctggtgaagctctgcgtgaagagcgccatgcccgccgtcgcc
gtgacggacaccggcaacctcttcggcgcgctggagttcgcgtccgaggcggccgcgtcc
ggggtgcagccgatcgtcggctgcgtcttcggcgtcacccgcgtcgccggccggccgtcc
gtcaacggcctcgcgccgccgccggatcgcatggtgatgctggtccaggacgagaccggc
tacgccaacctgctgcggctcgtcagccgcgccttcatggagagcgacggcacccgcgag
gcccagctgtccctgtccgatctcgcaggtgccaccgacgggcttctggccttcgtcggt
gcgaccgacagccccgtcggccgcctcctggtcgagggccagcgggacaccgcgcggcag
tgcctggacgatctgcgggcgctgtttcccgaccgtctctacatcgagttgcagcgccac
gggctggcggcggaggaggcgatcgagccggagctgctggcgctcgccgacgcgacgggc
ctgccgctcgtcgcgaccaacgacgcctatttcgccgaccgctcgatgtacgaggcgcac
gacgccctgatctgcatcgccgagggcgtgaccgtatcgatcgagcagcgtcggcgcctg
accccggagcatggcttcaagtcggcgcaggagatgcgggaactcttcgccgacattccc
gaggcgatcgacaacacactggtggtggcgcggcgctgcgcctacatgccggagaagcgc
aagcccatcctgccgcccttcgcgacggagagcggccgcggcgagccggaggaactgcac
gcccaggcccatcaggggctcgacgcgcggctggcccagatggccgagcagccggagccg
ggcccctatcgcgagcgactcgacttcgaactcgacgtcatcgtgcggatgggcttcgcc
ggctacttcctcatcgtcgcggacttcatccagtgggccaagcggcaggggatcccggtc
ggccctggtcgtggttccggcgccgggtcggtcgtcgcctgggcgctgtccatcaccgat
ctcgacccgctgcgccacggcctgctgttcgagcgcttcctcaatcccgagcgcgtgtcg
atgccggatttcgacatcgacttctgccaggaccggcgcgacgaggtcatccgctacgtc
cagggccgctacggccgcgaccgcgtcgcccagatcatcaccttcggcaagctgcaggcg
cgggccgtgctgcgcgacgtcggccgcgtgctggagatgccctacggccaggtcgaccgc
atctgtaagctggtgccgaacaaccccgccaacccggtgacgctgcgccaggcgatcgac
ggcgagccgctgctgcagtcgatgcgcgacgaggacgagcaggtggcgcgcctgatcggc
atcgcgctgcagctcgagggcctctatcgccacgcctcgacccacgccgccggcgtcgtc
atcggcgaccggccgctcgatgaactggtgccgctctaccgcgacccgcggtcggacatg
ccggtcacccagttcaacatgaagtatgtcgagacggccgggctggtgaagttcgacttc
ctcggcctcaagaccttgaccgtcctggccaaggccgaggagttgctgcgccgtcgcggg
gtgacgatcgacctcgccaacctgccgctcgacgacgggccgaccttcgagatgctgggc
cgggccgatgcgacgggcgtgttccagctggaaagccagggcatgcgcgacgtgctgcgc
aagctgcggcccgaccggttcgaggacatcgtcgccgtcgtcgcgctctatcgccccggc
ccgatggagaacatcccgcgctacatcgcctgcaagcacggcgaggagaagccggactac
ctgcacccctcgatcgagccgatcctgaaggagaccttcgggatcatgatctatcaggaa
caggtcatgcagatcgcccggacgctctcgggctacagcctcggcggggcggacctgctg
cgccgcgcgatgggcaagaagatcaaggaagagatggacgcccagcgccaggcgttcgtc
gacggggcggtcgccaacggcgtcgagaaggcgaccgcaggccacgtcttcgaccaggtg
gcgaagttcgccggctacggcttcaacaagtcgcacgcggcggcctacgcgctggtcgcg
taccagaccgcctatctcaaggcgaactatccggtcgagttcttcgccgcgtccatgtcg
ctcgacctcggcaacaccgacaagctcgccaccttccgccaggagctgtcgcgcctcggc
atcccgctgctgccgccggacgtcaacggctcgcaggtcgagttctcggtcgagacgcgg
ctggacggtgtgggctgcgtgcgctatgcgctggccggcctcaagggggtcggcatcccc
gccatgcaggcgatggtggcctcccgcgccgaccggccctttgccggcctggaggacttc
gccgcccgcatcgattcgcgcgccgtcacccgcaagcaggtggaggtgctggcgcgggcg
ggtgccttcgacgggttcggcatcggccgggcacgggtcatggccgcggccgaactggtc
gtgcgtgaggccgccgcggccgccgccgaccgcgacagccggcaggagacgctgttcggt
ggctcgggcgccccgaaatggcgcctgccggatgtgcccgactggaacctcttcgacaag
ctgcagaacgagttcgaggcgatcggcttctatctctcgaaccatccgctcgacgcctac
ggcaagagcctcgaccgcatcggcgtcatccgctcggccgacctgccggcgcgcctcgcc
atgggcgggtcgacccgcgtgaagctggccgggatcgtggtcggcaagcgcgagcggacg
tccgcgcgcggcaaccggttcgccttcgtccagatgtcggatgcgagcggcctctacgag
atcgcggtcttctccgaggtgctgagcgtcgcccgcgatctgctcgacagcgggcagccg
ctcctcgtcacggcggatgcccgtgcggaaggcgagaccatccgcctcggtgccgcgcag
atcgaggcgctggacaaggctaccagctcggcccaggccggcatgcggatccatctcggc
ggtgattcggcgctggagagcctgcggcggctgatcgagaaggaggcctccggccggggc
gggcggggccggatcagcctcgtcctcggcgtcgaccgcgtgcaggaggtcgaggtcgcg
ctgcccgggttctaccgcgtgacgccgcaggtgcgcgccgcggtcaagagcctcgtcggg
gtcgtcgacgtccaggacatctga
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