Stella sp. ATCC 35155: STAQ_32490
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Entry
STAQ_32490 CDS
T07954
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
stel
Stella sp. ATCC 35155
Pathway
stel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STAQ_32490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stel03019
]
STAQ_32490
03009 Ribosome biogenesis [BR:
stel03009
]
STAQ_32490
Enzymes [BR:
stel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
STAQ_32490
Messenger RNA biogenesis [BR:
stel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
STAQ_32490
Ribosome biogenesis [BR:
stel03009
]
Prokaryotic type
rRNA processing factors
STAQ_32490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Ogr_Delta
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
BBK38171
LinkDB
All DBs
Position
complement(3422197..3425832)
Genome browser
AA seq
1211 aa
AA seq
DB search
MAKRMLIDATHPEETRVVILSGSRLEEFDFETSTKKQVKGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYRIPVADREALLAEQAADDDDEEEFESEPRRRQRRPRRGERR
DGGRAAQADGEGDGGTETMAADDAGWDRRPAADREGDDAPDHSEGDHPEEDESAETVDGA
DTVEGQGTESEGSGRPPPAMAAADGLRVPSLRSDRMEPHAATGDEQAVPAESGDPAVAQG
ATGEAAAEQPADSAAAIWQPAEAVVAEPAAEPAATEADIEPAWEADAAGRVEADGAEGLP
EDGRDDEGRDHEDQDEGAPHGAPGSDDNGEGPPPTAEEEAERSEAAAAIETLGGDELEDV
RRRRQRSTRQYKIQEVIKRRQIMLVQVTKEERGNKGAALTTFLSLAGRYCVLMPNAGRSG
GGVSRKIVNPVDRRRLKSLIEEMQLPEGMSVIVRTAGSERSRAEIKRDLEYLLRLWDEIR
ELTMQSTAPALVYEEGKLIKRAIRDLYSRDIEEILVEGEDAYREAKDFMRMLMPSHAKRV
QPYRDPGIPLFNRFQIDQQIDAIHSPVVQLKSGGYIVINPTEALVAIDVNSGRSTRERNI
EETAYRTNLEAADEIARQLRLRDLAGLIVIDFIDMEEGRNQHAVERRLKEAMKVDRARIQ
IGRISPFGLLELSRQRLRPSIFETSTQPCPHCGGTGHIRSTESTALHVLRAIEEEGLRRR
SAEIRVTVPTAVALYVLNQKRAALSDIERRYAFDVVIDRDDELIPPDYRLERLRVRAASD
APPLPAPLPIEPEDDDLDIEDEAAEDEAEEAAADAAEGGEAPAGDAGDEEDGGRRRRRRR
RRRDERGPSEERGRNEEHSPAEDAGEAQDQPAVAAEGEPAPEADATAPATGEATSEADDG
EEDEDGEGASEAAGDDEDQQARRRRRRGRRGGRRRTRREDEGQGEAAAEAEADEPVAAVA
APPVAMPPVAMPAVAMPLDPRAAVEALFEALEAQHEARRQAPKADAVDREAAGAPTDERS
TPAQPSHEAAAEDPWRAATAPSDAGTPPAEPEAVPQPDAEPAVAEDARTVAPDAGDEGSS
VAGDAAVPAASGDDAATQTIPAAEPVEATAPEPAESTAAEPAVTDTAPADTAARDAGPVA
LPLVFAAPTASAPTAPTEPSVDAAAEARDPASQQTPEPAPAAATSEPVVTTPAEPARPAR
KGWWQRLVETR
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgcatgctgatcgatgccacccatcccgaagaaacacgggtggtcatcctt
tccggtagtcgtctggaagagttcgatttcgagacgtccaccaagaagcaggtcaagggg
aacatctatcttgcgaaggtcacccgggtagagccgtcgcttcaggctgccttcgtcgag
tacggcggcaaccggcacggcttcctcgccttcagcgagatccatcccgactattaccgc
atccccgtcgccgatcgcgaggcattgctggccgagcaggccgccgacgacgatgacgag
gaggaattcgagtccgagccccgacgccgccagcggcgaccgcgtcgcggcgagcggcgg
gacggcgggcgcgcggcgcaggccgacggcgagggcgacggcggcaccgaaacgatggct
gccgacgatgccggatgggaccgccgcccggcggcggaccgcgagggcgacgatgccccc
gaccattcggaaggcgaccatccggaagaggacgaaagcgccgaaaccgtcgatggcgcc
gataccgtcgaagggcagggcacggagagtgaaggcagcggtcgtccgccgccggcgatg
gcggccgccgatggtctgcgcgtaccgagcctgcgctccgaccggatggaaccgcacgcg
gcgaccggcgacgaacaggccgtgccggccgagagcggcgatcctgcggtcgcgcagggc
gcgaccggggaggctgcagccgaacagccggcggattcggccgcggccatctggcaaccc
gccgaagctgtggtggcggagccagcggccgaacccgcggccacggaagccgacatcgag
ccggcctgggaagcggatgcggccgggcgcgtcgaggcggacggcgccgagggccttccg
gaagacggccgggacgacgaaggccgggaccacgaggaccaggacgagggcgccccgcac
ggagcgccgggctccgacgacaacggcgaggggccgccgccgaccgccgaggaggaggcc
gagcgttccgaggccgctgccgcgatcgagacgctgggcggggacgaactcgaggatgtg
cgccgccggcgccagcgcagcacccgccagtacaagatccaggaagtgatcaagcgccgg
cagatcatgctggtgcaggtgaccaaggaggagcgcggcaacaagggtgcggcgctgacg
accttcctctcgctcgccggccgctactgcgtgctgatgccgaatgccgggcggtccggt
ggcggcgtctcccgcaagatcgtcaatcccgtcgaccgccgccgcctgaagtcgctgatc
gaggagatgcagctgccggagggcatgtcggtcatcgtccgcaccgccggcagcgaacgc
agccgggcggagatcaagcgcgatctcgaatacctgctgcggctgtgggacgagatccgc
gagctgaccatgcagtcgaccgcgccggccctggtctacgaggaaggcaagctcatcaag
cgggccatccgcgacctctattcccgcgacatcgaggagatcctggtcgaaggcgaggac
gcctatcgcgaggccaaggacttcatgcggatgctgatgccgagccacgccaagcgcgtg
cagccgtatcgcgatcccggcatcccgctgttcaaccgcttccagatcgaccagcagatc
gacgcgatccacagcccggtggtgcagctcaagtcgggcggctacatcgtcatcaacccg
accgaggcgctggtcgcgatcgacgtcaactccggccgctcgacccgcgagcgcaacatc
gaggagacggcctaccgcaccaacctcgaggcagccgacgagatcgcgcgccagctgcgc
ctgcgcgacctggcgggcctcatcgtcatcgacttcatcgacatggaggaggggcgcaac
cagcacgccgtcgagcggcggctgaaggaggcgatgaaggtcgaccgggcccgtatccag
atcgggcgcatcagcccgttcgggctgctcgaactgtcgcgccagcgcctgcgtcccagc
atcttcgagacctcgacccagccctgcccgcattgcggtggcaccggccacatccgctcg
acggagtcgacggcgctgcatgtcctgcgcgccatcgaggaagaggggctgcggcggcgc
agcgcggagatccgcgtgaccgtgccgacggcggtcgcgctctatgtgctgaaccagaag
cgtgccgcactgtccgacatcgagcggcgctatgccttcgacgtcgtcatcgatcgcgac
gacgaactgattccgcccgactaccggctggagcgactgcgggtgcgggccgccagcgat
gcgccgccgctgccggcaccgctgccgatcgaacccgaggacgacgatctcgacatcgag
gacgaggccgccgaggacgaggccgaggaagctgcggccgacgcggcggagggcggcgag
gccccggccggggatgccggcgacgaggaggatggcggtcggcgccgtcgtcgccgccgt
cggcggcgtgacgagcgggggccgtccgaggaacgcggccggaatgaagagcacagcccg
gccgaagacgcgggcgaggcgcaagaccagccggccgtcgcggcggagggcgagcctgcg
ccggaggccgatgcaaccgcaccggccacgggcgaagccacctccgaggccgacgacggc
gaggaagacgaggacggcgaaggcgccagcgaggctgcgggcgacgacgaggaccagcag
gcgcgccgccgccggcgccgtggccgccggggcggccgccggcgcacgcgccgcgaggac
gaggggcagggcgaggcagccgccgaagcggaggcggacgagccggtcgcggccgtcgcc
gcgcctcccgtcgccatgcctcccgtcgccatgcccgccgtagcgatgccgctcgatccg
cgcgcggcagtggaagccctgttcgaggcgctcgaggcgcagcacgaggcgcgacggcag
gctcccaaggccgacgccgtcgaccgggaggccgcaggggcgccgaccgacgagcggagc
acgccggcccagccgtcgcacgaagcagcggccgaggatccctggcgcgccgcgaccgcg
ccgtccgacgccgggacgcctccggcagagcccgaggccgtgccgcagccggatgcggaa
ccggcggtggcggaggatgcccggaccgtcgcaccggatgccggcgacgagggttcgtcc
gtggccggcgacgcagcggttccggccgcatccggagacgacgcggcaacccagaccatc
ccggcggccgaaccggtcgaagcgacggccccggaaccggccgaatcgacggccgcagaa
ccggcggtgacggatacggcgccggccgatacggccgcgagggacgcaggaccggtcgcg
ctgcccctggtcttcgcggccccgaccgcctcggccccgactgccccgaccgagccgtcg
gtggacgccgccgcggaggcgcgcgatccggcttcgcagcagacgcccgagccggctccg
gcggctgcgacatcggaacccgtcgtcaccacccccgccgagccggcacggccggcgcgc
aagggctggtggcagcggctggtggaaacccgttga
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