Stella sp. ATCC 35155: STAQ_39510
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Entry
STAQ_39510 CDS
T07954
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
stel
Stella sp. ATCC 35155
Brite
KEGG Orthology (KO) [BR:
stel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stel03016
]
STAQ_39510
Enzymes [BR:
stel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
STAQ_39510
Transfer RNA biogenesis [BR:
stel03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
STAQ_39510
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
BBK38873
LinkDB
All DBs
Position
complement(4194627..4195169)
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AA seq
180 aa
AA seq
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MLRLFVAIPLPESLRRALVLLGGGIPGASWVAEDNLHLTLRFIGEVDEGTAADIDEELIG
LQVPAVEVQVAGMGQFGEGERARLLYAAVARTPELVHLQERVEAAVARGGSPAEKRKFAP
HVTLARLKGAAMPRVQAFIAAHSLFRAPPFIADRVVLYSSHLARDGAIYRAEADYPLRTW
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcctgttcgtcgccatccccctgccggaatcgctccgccgcgcgcttgttctg
cttggcggcggcattcccggtgcgtcctgggtggcggaggacaatctgcacctgacgctg
cgcttcatcggcgaggtcgacgagggcaccgcggccgacatcgacgaggaactcatcggg
ctccaggtgccggcggtcgaggtccaggtcgccggcatgggccagttcggcgagggcgag
cgcgcccggctgctctatgccgccgtcgcccgcacgcccgaactcgtccacctgcaggag
cgggtcgaggcggcggtggcgcgcggcggcagtccggccgagaagcgcaagttcgcgccg
cacgtcacgctcgcgcgcctcaagggggcggccatgccgcgggtgcaggccttcatcgcc
gcccattcgctcttccgcgcgccgcccttcatcgccgatcgcgtcgtgctctattccagc
cacctcgcccgcgacggcgcgatctaccgcgccgaggcggactatcccctgcggacttgg
tga
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