Stenotrophomonas sp. MYb57: CLM74_00420
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Entry
CLM74_00420 CDS
T05384
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
stem
Stenotrophomonas sp. MYb57
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stem03032
]
CLM74_00420
03400 DNA repair and recombination proteins [BR:
stem03400
]
CLM74_00420
Enzymes [BR:
stem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CLM74_00420
DNA replication proteins [BR:
stem03032
]
Prokaryotic type
DNA Topoisomerases
CLM74_00420
DNA repair and recombination proteins [BR:
stem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLM74_00420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AVJ31351
LinkDB
All DBs
Position
102640..103701
Genome browser
AA seq
353 aa
AA seq
DB search
MPATPTPERQAARAAGLRYVDDTQPGFSRVRAGKGFSYRDADGHVVRDAATLQRIRALAI
PPAYTAVWICARADGHLQATGRDARGRKQYRYHADWAAVRDAGKFDRTIAFGQALPALRR
RLGRDLKRSGFPREKVLAVVVALLADTLVRVGNETYAQENKSYGLTTLRNRHLDLLRGGR
VRMRFRGKSGQLQEVVVGDRRLGALVRSVQQLPGQALFQYRDDAGEVQPVDSGAVNDYLR
EVMGEDFTAKDFRTWGGTMAAVQAFAATELPEPASQRALAKAQREVVCQVAARLGNTPAV
CRKAYIDPCVFAGWERGELTALAGLRGPRQWEQATLKVLRRARRLSRKAGQPQ
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgacccccacacccgaacgccaggccgcgcgcgccgccggcctgcgctacgtc
gatgacacccagcccggcttcagccgcgtccgcgccggcaagggtttttcctatcgcgat
gccgatggtcatgtcgtgcgcgatgccgccaccctgcagcgcatccgcgcgctggccatt
ccaccggcctataccgccgtgtggatctgtgcccgcgccgatggccacctgcaggccacc
ggccgcgacgcgcgcgggcgcaagcagtaccgctaccacgccgactgggcggccgttcgc
gacgccggcaagttcgaccgcaccatcgccttcggccaggcgttaccagcgctgcggcgg
cgcctgggccgcgacctcaagcgcagcggtttcccgcgcgagaaggtgctggcggtggtg
gtcgcgctgctggccgacacgctggtgcgggtgggcaatgaaacctatgcgcaggagaac
aagtcatacggcctgacaacgttgcgcaaccgtcacttggacctgcttcggggtggccgg
gtgcgcatgcgcttccggggcaagtccgggcagttgcaggaggtggtggtcggtgaccgt
cggctgggcgcgctggtgcgcagcgtgcagcagctgccgggtcaggccctgttccagtac
cgcgacgacgcgggcgaggtgcagccggtggattcgggcgcggtgaacgactacctgcgc
gaggtgatgggcgaggacttcaccgccaaggacttccgcacctggggcggcacgatggcg
gcggtgcaggccttcgccgccaccgagctgcccgagccggccagccaacgcgcgctggcc
aaggcgcaacgcgaggtggtgtgccaggtggctgcgcgcttgggcaatacgccagcggta
tgccgcaaggcctacatcgatccctgcgtgttcgccggttgggaacgcggcgaactgacc
gcactggcgggcctgcgcggcccgcggcagtgggaacaggcgacactgaaggtgctgcgc
cgggcccggcggctcagccgcaaggcaggtcagccgcagtag
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