Stenotrophomonas sp. MYb57: CLM74_02640
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Entry
CLM74_02640 CDS
T05384
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00260
Glycine, serine and threonine metabolism
stem00270
Cysteine and methionine metabolism
stem00450
Selenocompound metabolism
stem00670
One carbon pool by folate
stem01100
Metabolic pathways
stem01110
Biosynthesis of secondary metabolites
stem01230
Biosynthesis of amino acids
Module
stem_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CLM74_02640
00270 Cysteine and methionine metabolism
CLM74_02640
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CLM74_02640
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CLM74_02640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stem04147
]
CLM74_02640
Enzymes [BR:
stem01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
CLM74_02640
Exosome [BR:
stem04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CLM74_02640
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Met_gamma_lyase
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AVJ31754
LinkDB
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Position
577803..578987
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AA seq
394 aa
AA seq
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MSNASSPDRALALATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNP
TRFAYERCVASLEGGTRGFAFASGMAASSTVIELLDAGSHVVAMDDIYGGSFRLFERVRR
RTAALDFSFVDLTDLAAFEAAITPKTKMVWIETPTNPMLKIVDIAAVAAIAKRHGLIVVV
DNTFASPMLQRPLELGADLVLHSATKYLNGHSDMVGGMVVVGDNAELAEQMAFLQNSVGG
VQGPFDSFLALRGLKTLPLRMKAHCANAMALAQWLEKHPAVEKVIYPGLASHPQHELAGK
QMAGYGGIVSIVLKGGFEAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARRE
QLGISDALVRLSVGVEDLGDLQVDLERALASTAA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcttcttccccggaccgcgcgctggcgctggccaccctggccatccatggc
ggccagtcgcccgacccgagcaccggcgcggtgatgccgccgatctacgccacctcgacc
tatgcgcagtccagcccgggcgagcaccagggcttcgagtactcgcgtacccacaacccg
acccgcttcgcctacgagcgttgcgtggcctcgctggaaggcggcacccgtggcttcgcc
ttcgcgtcgggcatggctgccagctccaccgtgatcgagctgctggatgctggcagccac
gtggtggcaatggacgacatctatggcggcagcttccgcctgttcgagcgcgtgcgccgc
cgcaccgccgcactggacttcagcttcgtcgacctgaccgatctggcggccttcgaagcg
gcaatcaccccgaagaccaagatggtgtggattgaaactcccaccaacccgatgctgaag
atcgtggacatcgccgcggtcgccgccatcgccaagcgccatggcctgatcgtagtggtc
gacaacaccttcgcctcgccgatgctgcagcgtccgctggagctgggcgcggacctggtg
ctgcattcggccaccaagtacctcaacggccattcggacatggtcggtggcatggtcgtg
gtcggcgacaacgccgaactggccgagcagatggccttcctgcagaactcggtgggtggc
gtgcagggcccgttcgacagcttcctcgcattgcgtggcctgaagaccctgccgctgcgc
atgaaggcgcactgcgccaacgcgatggcgcttgcacagtggctggaaaagcacccggcg
gtggagaaggtgatctacccgggcctggcctcgcacccgcagcatgagctggcgggcaag
cagatggccggctacggcggcatcgtctcgatcgtgctgaagggtggtttcgaggcggcc
aagcgcttctgcgagaagaccgaactgttcaccctggccgagtcgctgggcggggtggaa
agcctggtgaaccacccggcggtgatgacgcatgcgtcgatcccggtggcacgccgcgag
cagctgggcatcagtgatgcactggtaaggctgagcgtgggtgttgaggacctgggggat
ctgcaggtggatcttgagcgggcgctggcgagtactgctgcgtga
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